Protein Model on 8alk assembly_id=1
(TEMPLATE: 
8alk
assembly_id:1
)Protein Model on 8alk assembly_id=1
(TEMPLATE: 8alk
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [447 aa] | Phosphocholine hydrolase Lem3 :LEM3_LEGPH | 14L(I) 68E 69R 70F 71Q(R) 72S(T) 73L(I) 74G(T) 75V(S) 76A(T) 77F(Y) 78Y 79R 102W 109Q(Y) 110A (identity: 43.8 %/37.1 %) | |
| 2 | b | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [163 aa] | Ras-related protein Rab-1B :RAB1B_HUMAN | |
| 3 | c | C 1 (A) | non-polymer(CA) | CALCIUM ION | ||
| 4 | d | D 1 (A) | non-polymer(CA) | CALCIUM ION | ||
| 5 | e | E 1 (A) | non-polymer(CA) | CALCIUM ION | ||
| 6 | f | F 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 63D 125N 126K 128D 129L 155S 156A 157K (identity: 82.4 %/37.1 %) | |
| 7 | g | G 1 (B) | non-polymer(CA) | CALCIUM ION | 22T(S) 44D 63D (identity: 66.7 %/37.1 %) | |
| 8 | h | H 1 (B) | non-polymer(OJU) | 2-[[[5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxyethyl-[3-(2-chloranylethanoylamino)propyl]-dimethyl-azanium | 76A(T) (identity: 0.0 %/37.1 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:8alk_B_1 identity=37.1% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * ** * *********** **** * *** * * :
8alk_B_1 9:LFKLLLIGDSGVGKSCLLLRFADDTYTXXXXXXXXVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSTYYRGAHGIIVVYDVTDQESYANVKQWLQEID: 108
SecStr :EEEEEEESSTTSSHHHHHHHHHT -------- EEEEEEEETTEEEEEEEEE TTGGGT S S SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbebbbbeebbbbebbbbbeeeeee--------eeeeeeebeeeeeebebbbebeeeeeeeeeeeeeeeeeeebbbbbbbbeeeebbeebeeebeebe:
Contact : a ffffffff f g f aaaaaaaaaaaa a
Contact : g g h
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: * ** *** ** * ** ***** * ****** * *:
8alk_B_1 109:RYAX----ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 167
SecStr :HH ----- EEEEEEE TT TTT S HHHHHHHHHHTT EEE BTTTTBTHHHHHHHHH:
ExpBur :eee-----eebeebbbbbebeeeeeeebeeeebeeebeeeebebebbbbeeeeebeebbeebb:
Contact : aa ff ff fff
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