Protein Model on 7e8t assembly_id=1 (TEMPLATE: 7e8t assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (L) polymer(polypeptide(L)) [194 aa] GTP-binding protein YPT32/YPT11 :YPT32_YEAST
2 b B 1 (I) polymer(polypeptide(L)) [788 aa] Trafficking protein particle complex II-specific subunit 130 :TR130_YEAST
3 c C 1 (J) polymer(polypeptide(L)) [882 aa] Trafficking protein particle complex II-specific subunit 120 :TR120_YEAST 131N(H) 132R 135A(P) 136T 143C(A) 144Y(M) 148N(Q) 149I(M) 150P(L) 151Y(F) 153E 158E(N) 160I(D) 161N 165A 168T(E) (identity: 31.2 %/36.3 %)
4 d D 1 (K) polymer(polypeptide(L)) [251 aa] Trafficking protein particle complex II-specific subunit 65 :TRS65_YEAST
5 e E 1 (B) polymer(polypeptide(L)) [197 aa] Trafficking protein particle complex subunit 33 :TRS33_YEAST
6 f F 1 (G) polymer(polypeptide(L)) [202 aa] Trafficking protein particle complex subunit 31 :TRS31_YEAST
7 g G 1 (E) polymer(polypeptide(L)) [163 aa] Trafficking protein particle complex subunit 23 :TRS23_YEAST 10K 33F 34S(N) 35N(I) 41I 45F 47T 58T(K) 60Q 62W 72S(A) 73L(I) 77F(Y) 79R 80G (identity: 60.0 %/36.3 %)
8 h H 1 (H) polymer(polypeptide(L)) [147 aa] Trafficking protein particle complex subunit 20 :TRS20_YEAST
9 i I 1 (A) polymer(polypeptide(L)) [144 aa] TRAPP-associated protein TCA17 :TCA17_YEAST
10 j J 1 (D) polymer(polypeptide(L)) [156 aa] Trafficking protein particle complex subunit BET5 :BET5_YEAST 34S(N) 36Q(E) 40T 41I 69R (identity: 60.0 %/36.3 %)
11 k K 1 (F) polymer(polypeptide(L)) [183 aa] Trafficking protein particle complex subunit BET3 :BET3_YEAST 79R 109Q(N) (identity: 50.0 %/36.3 %)
12 l L 1 (C) polymer(polypeptide(L)) [185 aa] Trafficking protein particle complex subunit BET3 :BET3_YEAST 17S 37Y(S) 38K 39A(S) 66G 67Q (identity: 66.7 %/36.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7e8t_A_1 identity=36.3%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    *******  *        *    * ***  * *    *       **********      * ****     * *            *  *  :
7e8t_A_1      13:LFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELR: 112
SecStr          :EEEEEEE  TTSSHHHHHHHHS   SS   SSSSSSEEEEEEEEETTEEEEEEEEE    STTHHHHHHHTTT  EEEEEEESS STHHHHHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbeebbeebbeeeeeeeeeeeebbbebebebebeeeebebebbbbbeeeebeeebeeebeebbbbbbbbbbeeeebbebbeebbebbe:    
Contact         :  g      l               gggjllljg   g g          g g g   ll j  gg   g gg                           
Contact         :                          j      j                                     k                            

queryA       108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :  *      *      *** **   * * *  *       *     ****    **  **   :
7e8t_A_1     113:ENA----DDNVAVGLIGNKSDLAHLRAVPTDEAKNFAM-ENQMLFTETSALNSDNVDKAFREL: 170
SecStr          :SSS---- SS EEEEEEE GGG SS SS HHHHHHHHH-TTT EEEE  SS  HHHHHHHHHH:    
ExpBur          :eeb----eeebbbbbbbbebeeeeeeebeeeebeebbe-eeebeebebbeeeeeebeebbeeb:    
Contact         : k                     ccc  cc      cc   cccc c    c cc   c  c

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