Protein Model on 7bwt assembly_id=1
(TEMPLATE: 
7bwt
assembly_id:1
)Protein Model on 7bwt assembly_id=1
(TEMPLATE: 7bwt
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [284 aa] | SPI-1 type III secretion system effector SopD :A0A5K1V7S2_SALTM | 8L 38K(I) 43A(I) 45F 46L(K) 47T(I) 58T(K) 60Q 62W 68E 74G(T) 75V(T) 76A 79R 82D(M) (identity: 46.7 %/41.9 %) | |
| 2 | b | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [178 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
| 3 | c | C 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | 76A 79R (identity: 100.0 %/41.9 %) | |
| 4 | d | D 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | ||
| 5 | e | E 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 6 | f | F 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 7 | g | G 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 8 | h | H 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 9 | i | I 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 10 | j | J 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T 23S(C) 33F 34S(N) 125N 126K 128D 129L(V) 155S 156A 157K (identity: 82.4 %/41.9 %) | |
| 11 | k | K 1 (B) | non-polymer(MG) | MAGNESIUM ION | 22T 63D (identity: 100.0 %/41.9 %) | |
| 12 | l | L 1 (B) | non-polymer(GOL) | GLYCEROL | 27Q(R) 28Y(F) 31K(D) 48K(R) 159A(N) 162V 163E (identity: 28.6 %/41.9 %) | |
| 13 | m | M 1 (B) | non-polymer(GOL) | GLYCEROL | 10K 62W 64T 77F(Y) (identity: 75.0 %/41.9 %) | |
| 14 | n | N 1 (B) | non-polymer(GOL) | GLYCEROL | 29V(S) 30N(E) 47T(I) 48K(R) (identity: 0.0 %/41.9 %) | |
| 15 | o | O 1 (B) | non-polymer(GOL) | GLYCEROL | 28Y(F) 29V(S) 31K(D) 48K(R) (identity: 0.0 %/41.9 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:7bwt_B_1 identity=41.9% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******** * *** ** * *********** * **** ** * * * * :
7bwt_B_1 7:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 106
SecStr :EEEEEEEE TTSSHHHHHHHHHH SSS SS EEEEEEEETTEEEEEEEE TTTS SS HHHHTT EEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebebbbbbbeebbbeebbbbbbeeeeeeeeeeeeeeeebeeebebeeeebebbbbbbbeeeeeeebeeebbeebebbbbbbbbeeeebbeebeebbebbe:
Contact :a m jjjjjjjj llnnl jj a a aaal a a akm a aaam a a
Contact : k oo o nn m c c
Contact : o
queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: ** * * **** * *** * * ***** **** ** * ** :
7bwt_B_1 107:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 167
SecStr :HHS T-T EE---EEEEE TT TT S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH:
ExpBur :eebee-ebee---bbbbbeeebeeeeebeeeebeebbeee-ebebebbbbeeeeebeebbebbbeb:
Contact : jj jj jjj l ll
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