Protein Model on 6yx5 assembly_id=1
(TEMPLATE: 
6yx5
assembly_id:1
)Protein Model on 6yx5 assembly_id=1
(TEMPLATE: 6yx5
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [173 aa] | Ras-related protein Rab-8A :A0A1U7REJ8_MESAU | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [339 aa] | Multifunctional virulence effector protein DrrA :DRRA_LEGPN | 26N(F) 30N(E) 32K(A) 33F 34S(N) 35N(S) 36Q(T) 38K(I) 39A(S) 40T 41I 42G 43A(I) 44D 45F 46L(K) 47T(I) 58T(K) 60Q 69R 70F 73L(I) 77F(Y) (identity: 39.1 %/41.2 %) | |
| 3 | c | C 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T 40T 63D (identity: 100.0 %/41.2 %) | |
| 4 | d | D 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D 17S 18G 19V 20G 21K 22T 23S(C) 33F 34S(N) 35N(S) 36Q(T) 37Y(F) 39A(S) 40T 65A 66G 125N 126K 128D 129L(V) 155S 156A 157K (identity: 70.8 %/41.2 %) | |
| 5 | e | E 1 (A) | non-polymer(GLC) | alpha-D-glucopyranose | 127I(C) 132R 136T(K) 153E 160I 161N (identity: 66.7 %/41.2 %) | |
| 6 | f | F 1 (A) | non-polymer(LJN) | [(2~{R},3~{S},4~{R},5~{R})-5-[4-(acetamidomethyl)-1,2,3-triazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate | 77F(Y) (identity: 0.0 %/41.2 %) | |
| 7 | g | G 1 (A) | non-polymer(SO4) | SULFATE ION | 161N 162V 163E 164Q(N) (identity: 75.0 %/41.2 %) | |
| 8 | h | H 1 (A) | non-polymer(SO4) | SULFATE ION | 67Q 68E 69R (identity: 100.0 %/41.2 %) | |
| 9 | i | I 1 (B) | non-polymer(GLC) | alpha-D-glucopyranose | ||
| 10 | j | J 1 (B) | non-polymer(GLC) | alpha-D-glucopyranose | ||
| 11 | k | K 1 (B) | non-polymer(SO4) | SULFATE ION | ||
| 12 | l | L 1 (B) | non-polymer(SO4) | SULFATE ION | ||
| 13 | m | M 1 (B) | non-polymer(SO4) | SULFATE ION | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6yx5_A_1 identity=41.2% |
queryA 3:SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW: 102
:* * * ******** * *** ** * *********** * **** ** * * * *:
6yx5_A_1 1:SHMDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNW: 100
SecStr : SEEEEEEEE TTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTTTTT SEEEEEEETT HHHHHTHHHH:
ExpBur :eeeeeebebbbbbbeebbbebbbebbeeeeeeeeeeebebeeeeeeebebeeeebebebbbbbbeeebbeebeeebeebebbbbbbbbbeeebbeebeeb:
Contact : ddddddcd b b bbbbbdbbbbbbbbbb b b c ddhhbb b b
Contact : d dddd dc h f
Contact : d
queryA 103:RDEFLIQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: ** * * **** * *** * * ***** **** ** * ** :
6yx5_A_1 101:IRNIEEHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 166
SecStr :HHHHHHHS T-T EE---EEEEE TT GGG S HHHHHHHHHHT-T EEEE BTTTTBSHHHHHHHHHHH:
ExpBur :beebeeebee-ebbe---bbbbbebeeeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbbbbbeb:
Contact : ddedde e e e ddd eeggg
Contact : g
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