Protein Model on 6s5h assembly_id=1
(TEMPLATE: 
6s5h
assembly_id:1
)Protein Model on 6s5h assembly_id=1
(TEMPLATE: 6s5h
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [175 aa] | Ras-related protein Rab-38 :RAB38_HUMAN | |
| 2 | b | B 1 (A) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 16D 17S(L) 18G 19V 20G 21K 22T 23S 33F 34S 35N(S) 37Y 39A 40T 65A 66G 125N 126K 128D 129L(Q) 155S 156A 157K (identity: 87.0 %/37.4 %) | |
| 3 | c | C 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 73L(M) 77F(Y) (identity: 0.0 %/37.4 %) | |
| 4 | d | D 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 32K(N) 33F 34S 38K(R) (identity: 50.0 %/37.4 %) | |
| 5 | e | E 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 6 | f | F 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 17S(L) 18G 92A(R) (identity: 33.3 %/37.4 %) | |
| 7 | g | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 45F (identity: 100.0 %/37.4 %) | |
| 8 | h | H 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 28Y 29V 31K(Q) 47T(L) 48K 49E(V) (identity: 50.0 %/37.4 %) | |
| 9 | i | I 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 10 | j | J 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 90V 124G(A) 137K(N) 139A(M) 153E (identity: 40.0 %/37.4 %) | |
| 11 | k | K 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 96F 97K(E) 100D(A) (identity: 33.3 %/37.4 %) | |
| 12 | l | L 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T 40T 63D (identity: 100.0 %/37.4 %) | |
| 13 | m | M 1 (A) | non-polymer(BR) | BROMIDE ION | 67Q (identity: 100.0 %/37.4 %) | |
| 14 | n | N 1 (A) | non-polymer(BR) | BROMIDE ION | 94N(A) (identity: 0.0 %/37.4 %) | |
| 15 | o | O 1 (A) | non-polymer(BR) | BROMIDE ION | 36Q(H) (identity: 0.0 %/37.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6s5h_A_1 identity=37.4% |
queryA 4:RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW: 102
: * * * ** ****** ** ** * **** ** * * * * ** ****** ** * ***** * ** *:
6s5h_A_1 6:HKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKW: 105
SecStr :SEEEEEEEEEE STTSSHHHHHHHHHHS S SEEEEEEEEEEETTEEEEEEEEEE TTGGGSS HHHHHTTEEEEEEEEETT HHHHHHHHHH:
ExpBur :eeebebbbbbbbbeebbbbebbebbbeeeeeeeeeebeebeebebebeeeeebbbebebbbbbbeeeeeeebeebbeebbbbbbbbbeeeeebeebbbeb:
Contact : bbbbbbbb hh hdbbbobdbb g hhh l bbm c c j f n kk k
Contact : ff l dd l
queryA 103:RDEFLIQASPRDPENFPFVVLGNKIDLENRQVATK--RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE: 177
: * * * ** * * ******* ** * * *:
6s5h_A_1 106:KNDLDSKLSLPNGKPVSVVLLANKCDQXXXXXXXNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE: 182
SecStr :HHHHHHH TTS EEEEEEE TT ------- HHHHHHHHHHHT SEEEEEBTTTTBSHHHHHHHHHHHHHH :
ExpBur :bebbeeebebeeeeebbbbbbbbeeee-------eeeebeebbeeeebebeeebbbeeeeebeebbeebbeebbeee:
Contact : jbb bb j j j bbb
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