Protein Model on 6rir assembly_id=1 (TEMPLATE: 6rir assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [173 aa] Ras-related protein Rab-8A :RAB8A_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [175 aa] Ras-related protein Rab-8A :RAB8A_HUMAN
3 c C 1 (D) polymer(polypeptide(L)) [32 aa] RILP-like protein 2 :RIPL2_HUMAN 41I 43A(I) 44D 45F 47T(I) 62W 70F 72S(U) 73L(I) 77F(Y) (identity: 50.0 %/41.2 %)
4 d D 1 (C) polymer(polypeptide(L)) [32 aa] RILP-like protein 2 :RIPL2_HUMAN 41I 69R 70F 72S(U) (identity: 75.0 %/41.2 %)
5 e E 1 (A) non-polymer(GTP) GUANOSINE-5'-TRIPHOSPHATE 16D 17S 18G 19V 20G 21K 22T 23S(C) 33F 34S(N) 35N(S) 36Q(T) 37Y(F) 39A(S) 40T 64T 65A 66G 125N 126K 128D 129L(V) 155S 156A 157K (identity: 72.0 %/41.2 %)
6 f F 1 (A) non-polymer(MG) MAGNESIUM ION 22T 40T (identity: 100.0 %/41.2 %)
7 g G 1 (A) non-polymer(GOL) GLYCEROL 10K 62W 77F(Y) 80G 81A (identity: 80.0 %/41.2 %)
8 h H 1 (B) non-polymer(GTP) GUANOSINE-5'-TRIPHOSPHATE
9 i I 1 (B) non-polymer(MG) MAGNESIUM ION
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6rir_A_1 identity=41.2%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    ********          *      *** **       *      ******* ***     * ****    ** * *    *     *     :
6rir_A_1      11:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGLERFRUITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 110
SecStr          :EEEEEEE STTSSHHHHHHHHHHS          SEEEEEEEEEETTEEEEEEEEEE  SGGGHHHHHTTTTT SEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebebbbbbbeebbbebbbebbeeeeeeeeeeebebbeeeeeebebeeeebebbbbbbbbeeebeeebbeebeebebbbbbbbbbeeebbeebeebbebbe:    
Contact         :  g     eeeeeeee         eeeee eec ccc c              c eee  dc cc   c  gg                          
Contact         :              f                 fd                    g       d d    g                              

queryA       108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
                :  **  * *      **** *    ***   *          *   *****  **** ** * ** :
6rir_A_1     111:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 171
SecStr          :HHS T-T EE---EEEEE TT GGG  S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH:    
ExpBur          :eebee-ebee---bbbbbebeeeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbbbbbee:    
Contact         :                 ee ee                          eee                                                 


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