Protein Model on 6l6o assembly_id=1
(TEMPLATE: 
6l6o
assembly_id:1
)Protein Model on 6l6o assembly_id=1
(TEMPLATE: 6l6o
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [165 aa] | Rab5a :A0A109NYM0_LEIDO | |
| 2 | b | B 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D(E) 17S 18G 19V(A) 20G 21K 22T(S) 23S 33F 34S(L) 35N(A) 36Q(N) 68E 125N 126K 128D 129L 155S 156A 157K (identity: 70.0 %/40.1 %) | |
| 3 | c | C 1 (A) | non-polymer(GOL) | GLYCEROL | 128D 129L 130E(G) 131N(S) (identity: 50.0 %/40.1 %) | |
| 4 | d | D 1 (A) | non-polymer(ACT) | ACETATE ION | 141A(R) (identity: 0.0 %/40.1 %) | |
| 5 | e | E 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 63D (identity: 50.0 %/40.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6l6o_A_1 identity=40.1% |
queryA 10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109
:* ** ** ** * * **** ** * ** * * ****** *** ** **** * * * * * * :
6l6o_A_1 17:KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRAN: 116
SecStr :EEEEEESTTSSHHHHHHHHHHS SS TTTS SEEEEEEE SSSEEEEEEE TTGGGGT HHHHTT SEEEEEEETT HHHHHHHHHHHHHHHHH:
ExpBur :bbbbbbbeebbbeebbbbbbeeeeeeeeeeeeeeeebeeebeeeeeebebebebbebebeeeebeeebbeebebbbbbbbbbeeebbeebeebbeebeee:
Contact : bbbbbbbb bbbb e b
Contact : e
queryA 110:ASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
:* * * *** ** *** * * *** **** * *:
6l6o_A_1 117:ADP----SLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA: 174
SecStr :S T----T EEEEEEE TT GGG S HHHHHHHHHHTT SEEEE BTTTTBSHHHHHHHHH:
ExpBur :bee----ebbbbbbbbeeeeeeeeebeeeebeebbeebebeebbbbbbeeeeebeebbeebb:
Contact : bb bbccc d bbb
Contact : cc
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