Protein Model on 5lef assembly_id=1 (TEMPLATE: 5lef assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [166 aa] Ras-related protein Rab-6A :RAB6A_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [159 aa] Ras-related protein Rab-6A :RAB6A_HUMAN
3 c C 1 (C) polymer(polypeptide(L)) [49 aa] Kinesin-like protein KIF20A :KI20A_MOUSE 41I 43A(I) 44D 45F 60Q 62W 77F(Y) (identity: 71.4 %/39.5 %)
4 d D 1 (D) polymer(polypeptide(L)) [47 aa] Kinesin-like protein KIF20A :KI20A_MOUSE 41I 43A(I) 69R 70F 73L 76A(S) 77F(Y) 79R 80G(D) (identity: 55.6 %/39.5 %)
5 e E 1 (A) non-polymer(GTP) GUANOSINE-5'-TRIPHOSPHATE 17S(Q) 18G(S) 19V 20G 21K 22T 23S 33F 34S(D) 35N 37Y 39A 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 86.4 %/39.5 %)
6 f F 1 (A) non-polymer(MG) MAGNESIUM ION 22T 40T 63D (identity: 100.0 %/39.5 %)
7 g G 1 (A) non-polymer(SO4) SULFATE ION 27Q(R) 31K(D) (identity: 0.0 %/39.5 %)
8 h H 1 (A) non-polymer(GOL) GLYCEROL 140Q(E) 151Y(F) 152F(I) 168T(R) (identity: 0.0 %/39.5 %)
9 i I 1 (B) non-polymer(GTP) GUANOSINE-5'-TRIPHOSPHATE
10 j J 1 (B) non-polymer(MG) MAGNESIUM ION
11 k K 1 (B) non-polymer(SO4) SULFATE ION
12 l L 1 (B) non-polymer(SO4) SULFATE ION
13 m M 1 (B) non-polymer(IPA) ISOPROPYL ALCOHOL
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5lef_A_1 identity=39.5%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                : *   **   ******        * * * **** *** *     ** *  * ***** *** **     *     * * * *  * *     * *    :
5lef_A_1      10:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRT: 109
SecStr          :EEEEEE STTSSHHHHHHHHHHS    S     SEEEEEEEEE SS EEEEEEEEE  SGGGGGGHHHHHHT SEEEEEEETT HHHHHTHHHHHHHHHH:    
ExpBur          :bbbbbbbbeebbbeebbeebbeeeeeeeeebbebbeeeeebbeeeeeebebebbbbbbeeebeeebeeebeebbbbbbbbbbbeeebbeebeebbeebee:    
Contact         :        eeeeeee   g   g eee e eec ccc              c cf ee  dd  d  dc dd                            
Contact         :             f                 fd d                                 d                               

queryA       109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :               *** **   ***             *    *****   ** * *   *:
5lef_A_1     110:ERGS----DVIIMLVGNKTDLADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVA: 167
SecStr          :HHTT----SSEEEEEEE TT GGG  S HHHHHHHH-HHTT EEEEEBTTTTBSHHHHHHHHH:    
ExpBur          :eeee----ebebbbbbbbbeeeeeeebeeeebeebb-eeeebebbbbbbeeeebbeebbeebb:    
Contact         :                ee ee           h          hh  eee          h                                       


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