Protein Model on 5jcz assembly_id=1 (TEMPLATE: 5jcz assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [172 aa] Ras-related protein Rab-11A :RB11A_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [364 aa] Unconventional myosin-Va :MYO5A_HUMAN 30N(R) 32K(E) 41I 42G 43A(V) 44D(E) 45F 46L(A) 47T 60Q 62W 67Q 70F(Y) 72S(A) 73L(I) 76A 79R (identity: 52.9 %/42.7 %)
3 c G 1 (A) non-polymer(MG) MAGNESIUM ION 22T(S) 40T (identity: 50.0 %/42.7 %)
4 d H 1 (A) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 37Y(S) 125N 126K 128D 129L 155S 156A 157K(L) (identity: 68.4 %/42.7 %)
5 e I 1 (A) non-polymer(BEF) BERYLLIUM TRIFLUORIDE ION 17S 18G 21K 39A(S) 40T 65A 66G (identity: 85.7 %/42.7 %)
6 f J 1 (A) non-polymer(EDO) 1,2-ETHANEDIOL 13I(L) 14L(I) 15G 64T 65A 66G 69R 77F(Y) 102W 105E (identity: 70.0 %/42.7 %)
7 g K 1 (A) non-polymer(EDO) 1,2-ETHANEDIOL 130E(R) 132R (identity: 50.0 %/42.7 %)
8 h L 1 (A) non-polymer(EDO) 1,2-ETHANEDIOL 96F(Y) 97K(E) 99L(V) 100D(E) 142W(F) (identity: 0.0 %/42.7 %)
9 i M 1 (A) non-polymer(ACT) ACETATE ION 140Q(R) 151Y(F) 152F(I) 153E 161N (identity: 40.0 %/42.7 %)
10 j N 1 (A) non-polymer(GOL) GLYCEROL 8L 9L(F) (identity: 50.0 %/42.7 %)
11 k O 1 (B) non-polymer(EDO) 1,2-ETHANEDIOL
12 l P 1 (B) non-polymer(EDO) 1,2-ETHANEDIOL 30N(R) (identity: 0.0 %/42.7 %)
13 m Q 1 (B) non-polymer(GOL) GLYCEROL 44D(E) (identity: 0.0 %/42.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5jcz_A_1 identity=42.7%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* **   *******  *        *    * ***  * *    **      **********      * ****    ** *     *      *  *  :
5jcz_A_1      13:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 112
SecStr          :EEEEEEE STTSSHHHHHHHHHHS   TT     SEEEEEEEEEETTEEEEEEEEEE SS   HHHHHHHHTT  EEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbebbbbbbbeeeeeeeeeebeeeeebeeebebeeeebebebbbbbbeeeeeeebeebbeebebbbbbbbbeeeebbeebeebbebbe:    
Contact         :jj   fffddddddcd      b bddd d ecbbbbbbb            b b feeb fb bb  bf b                hh hh f  f  
Contact         :         ee  ed       l         e   m                    ff                                         

queryA       108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :  *      *      *** **   * * *  * *    **     ****    *** *****:
5jcz_A_1     113:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 170
SecStr          :HHS T----T EEEEEEE TT GGG  S HHHHHHHH-HHTT EEEE  TTT TTHHHHHHHH:    
ExpBur          :ebbee----ebbbbbbbbebbeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeeb:    
Contact         :                 dd ddg  g       i h        iii ddd   i                                             


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