Protein Model on 5jcz assembly_id=1
(TEMPLATE: 
5jcz
assembly_id:1
)Protein Model on 5jcz assembly_id=1
(TEMPLATE: 5jcz
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [172 aa] | Ras-related protein Rab-11A :RB11A_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [364 aa] | Unconventional myosin-Va :MYO5A_HUMAN | 30N(R) 32K(E) 41I 42G 43A(V) 44D(E) 45F 46L(A) 47T 60Q 62W 67Q 70F(Y) 72S(A) 73L(I) 76A 79R (identity: 52.9 %/42.7 %) | |
| 3 | c | G 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T (identity: 50.0 %/42.7 %) | |
| 4 | d | H 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 37Y(S) 125N 126K 128D 129L 155S 156A 157K(L) (identity: 68.4 %/42.7 %) | |
| 5 | e | I 1 (A) | non-polymer(BEF) | BERYLLIUM TRIFLUORIDE ION | 17S 18G 21K 39A(S) 40T 65A 66G (identity: 85.7 %/42.7 %) | |
| 6 | f | J 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 13I(L) 14L(I) 15G 64T 65A 66G 69R 77F(Y) 102W 105E (identity: 70.0 %/42.7 %) | |
| 7 | g | K 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 130E(R) 132R (identity: 50.0 %/42.7 %) | |
| 8 | h | L 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 96F(Y) 97K(E) 99L(V) 100D(E) 142W(F) (identity: 0.0 %/42.7 %) | |
| 9 | i | M 1 (A) | non-polymer(ACT) | ACETATE ION | 140Q(R) 151Y(F) 152F(I) 153E 161N (identity: 40.0 %/42.7 %) | |
| 10 | j | N 1 (A) | non-polymer(GOL) | GLYCEROL | 8L 9L(F) (identity: 50.0 %/42.7 %) | |
| 11 | k | O 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 12 | l | P 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 30N(R) (identity: 0.0 %/42.7 %) | |
| 13 | m | Q 1 (B) | non-polymer(GOL) | GLYCEROL | 44D(E) (identity: 0.0 %/42.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5jcz_A_1 identity=42.7% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* ** ******* * * * *** * * ** ********** * **** ** * * * * :
5jcz_A_1 13:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 112
SecStr :EEEEEEE STTSSHHHHHHHHHHS TT SEEEEEEEEEETTEEEEEEEEEE SS HHHHHHHHTT EEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbebbbbbbbeeeeeeeeeebeeeeebeeebebeeeebebebbbbbbeeeeeeebeebbeebebbbbbbbbeeeebbeebeebbebbe:
Contact :jj fffddddddcd b bddd d ecbbbbbbb b b feeb fb bb bf b hh hh f f
Contact : ee ed l e m ff
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * *** ** * * * * * ** **** *** *****:
5jcz_A_1 113:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 170
SecStr :HHS T----T EEEEEEE TT GGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHH:
ExpBur :ebbee----ebbbbbbbbebbeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeeb:
Contact : dd ddg g i h iii ddd i
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