Protein Model on 5cll assembly_id=1
(TEMPLATE: 
5cll
assembly_id:1
)Protein Model on 5cll assembly_id=1
(TEMPLATE: 5cll
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [179 aa] | GTP-binding nuclear protein Ran :RAN_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [139 aa] | E3 SUMO-protein ligase RanBP2 :RBP2_HUMAN | 7V 9L(F) 27Q(R) 28Y(H) 30N(T) 31K(G) 32K(E) 49E(V) 53D(N) 54D(R) 82D(Q) 117N 118F(I) 119P 148N 159A(N) 161N 162V(F) 163E 172N(K) 173A(L) 174L(I) (identity: 27.3 %/34.0 %) | |
| 3 | c | E 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S(G) 18G 19V(T) 20G 21K 22T 23S(T) 33F 34S(E) 35N(K) 36Q(K) 37Y 38K(V) 125N 126K 128D 129L(I) 155S 156A 157K (identity: 61.9 %/34.0 %) | |
| 4 | d | F 1 (A) | non-polymer(BEF) | BERYLLIUM TRIFLUORIDE ION | 17S(G) 21K 22T 37Y 39A 40T 64T 65A 66G 67Q (identity: 90.0 %/34.0 %) | |
| 5 | e | G 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T 40T 63D (identity: 100.0 %/34.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5cll_A_1 identity=34.0% |
queryA 6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
: * * ** * *** * * ** * ******* * * * * * **** * * * :
5cll_A_1 8:QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRD: 107
SecStr : EEEEEEEE TTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHHHTTT EEEEEEETT HHHHHTHHHHHHH:
ExpBur :eeebbbbbbbbeebbbbbbbebbeeeeeeeeeeebebeeeeebebebeeeebebbbebbbbeeebeeebeebbeebebbbbbbbbeeeebbeebeebbeb:
Contact : b b cccccccc bb bbbccccccdd b bb edddd b
Contact : d dd d e
Contact : e
queryA 106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
: * ** * * *** * * * * * * * *** * * * ** :
5cll_A_1 108:LV-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 169
SecStr :HH-----TTSTT EEEEEE TTSSS SS GGG --HHHHTT EEEE TTT TTTTHHHHHHHHHHH:
ExpBur :be-----eebeebebbbbbbeeeeeeeebeeeebe--bbeeeebebbebbbeeeeeeeebbbbbbeeee:
Contact : bbb cc cc b ccc b bbb bbb
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