Protein Model on 4uj3 assembly_id=1 (TEMPLATE: 4uj3 assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [176 aa] RAS-RELATED PROTEIN RAB-11A :RB11A_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [161 aa] RAB-3A-INTERACTING PROTEIN :RAB3I_HUMAN 35N(L) 36Q(E) 128D 129L 130E(R) 131N(H) 132R 133Q(A) 157K(L) (identity: 33.3 %/42.0 %)
3 c C 1 (C) polymer(polypeptide(L)) [36 aa] RAB11 FAMILY-INTERACTING PROTEIN 3 :RFIP3_HUMAN 30N(R) 42G 43A(V) 44D(E) 45F 47T 62W 71Q(R) 73L(I) 76A (identity: 50.0 %/42.0 %)
4 d Y 1 (A) non-polymer(GNP) PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 37Y(S) 38K 39A(S) 40T 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 69.6 %/42.0 %)
5 e Z 1 (A) non-polymer(MG) MAGNESIUM ION 22T(S) 40T 63D (identity: 66.7 %/42.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4uj3_A_1 identity=42.0%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* **   *******  *        *    * ***  * *    **      ******* **      * ****    ** *     *      *  *  :
4uj3_A_1      12:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 111
SecStr          :EEEEEEEESTTSSHHHHHHHHHH    TT     SEEEEEEEEEETTEEEEEEEEEE S  SS   HHHHHTTEEEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbebbbbbbeeeeeeeeeeebeeeeebeeebebeeebbebebebbebebeebeebeebbeebebbbbbbbbbeeebbeebeebbebbe:    
Contact         :        dddddddd      c  ddbbdddd cccc c              ce  d    c c  c                               
Contact         :              e            d    e                                                                   

queryA       108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :  *      *      *** **   * * *  * *    **     ****    *** *****:
4uj3_A_1     112:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 169
SecStr          :HHS T----T EEEEEEE TT SSS  S HHHHHHHH-HHTT EEEE  TTT TTHHHHHHHH:    
ExpBur          :eebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebbbbbbbbeeeeebeebbeeb:    
Contact         :                 dd bbbbbbb                     ddb                                                 
Contact         :                    dd                            d                                                 


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