Protein Model on 4uj3 assembly_id=1
(TEMPLATE: 
4uj3
assembly_id:1
)Protein Model on 4uj3 assembly_id=1
(TEMPLATE: 4uj3
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [176 aa] | RAS-RELATED PROTEIN RAB-11A :RB11A_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [161 aa] | RAB-3A-INTERACTING PROTEIN :RAB3I_HUMAN | 35N(L) 36Q(E) 128D 129L 130E(R) 131N(H) 132R 133Q(A) 157K(L) (identity: 33.3 %/42.0 %) | |
| 3 | c | C 1 (C) | polymer(polypeptide(L)) [36 aa] | RAB11 FAMILY-INTERACTING PROTEIN 3 :RFIP3_HUMAN | 30N(R) 42G 43A(V) 44D(E) 45F 47T 62W 71Q(R) 73L(I) 76A (identity: 50.0 %/42.0 %) | |
| 4 | d | Y 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 37Y(S) 38K 39A(S) 40T 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 69.6 %/42.0 %) | |
| 5 | e | Z 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T 63D (identity: 66.7 %/42.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4uj3_A_1 identity=42.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* ** ******* * * * *** * * ** ******* ** * **** ** * * * * :
4uj3_A_1 12:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 111
SecStr :EEEEEEEESTTSSHHHHHHHHHH TT SEEEEEEEEEETTEEEEEEEEEE S SS HHHHHTTEEEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbebbbbbbeeeeeeeeeeebeeeeebeeebebeeebbebebebbebebeebeebeebbeebebbbbbbbbbeeebbeebeebbebbe:
Contact : dddddddd c ddbbdddd cccc c ce d c c c
Contact : e d e
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * *** ** * * * * * ** **** *** *****:
4uj3_A_1 112:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 169
SecStr :HHS T----T EEEEEEE TT SSS S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHH:
ExpBur :eebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebbbbbbbbeeeeebeebbeeb:
Contact : dd bbbbbbb ddb
Contact : dd d
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