Protein Model on 4qxa assembly_id=1
(TEMPLATE: 
4qxa
assembly_id:1
)Protein Model on 4qxa assembly_id=1
(TEMPLATE: 4qxa
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [172 aa] | Ras-related protein Rab-9A :RAB9A_MOUSE | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [147 aa] | Small G protein signaling modulator 1 :SGSM1_MOUSE | 38K(F) 40T 41I 42G 43A(V) 44D(E) 45F 46L 69R 70F 77F (identity: 72.7 %/54.7 %) | |
| 3 | c | C 1 (A) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 16D 17S(G) 18G 19V 20G 21K 22T(S) 23S 33F 34S(D) 35N(S) 36Q 37Y(L) 38K(F) 39A(H) 40T 64T 65A 66G 125N 126K 128D 129L(I) 155S 156A 157K (identity: 69.2 %/54.7 %) | |
| 4 | d | D 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T 63D (identity: 66.7 %/54.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4qxa_A_1 identity=54.7% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * * *** **** **** ** ** * *** ** * ** ********** *** ** **** *** * * * * * * ** :
4qxa_A_1 8:LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFI: 107
SecStr :EEEEEEEESTTSSHHHHHHHHHH S EEEEEEEEETTEEEEEEEEE SGGGHHHHGGGTTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbeebbebbeeeeeeeeeeebeeeeeeeeebebeeeebebbbbbbbbeeebeeebbeebeebebbbbbbbbeeeebbebbeebbebbe:
Contact : cccccccc cccccbcbbbbbbb dccc bb b
Contact : d c c
Contact : d
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE: 177
: * ** **** **** * *** * ***** ******** ** ** * * *:
4qxa_A_1 108:YYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATE: 177
SecStr :HHH S TTTS EEEEEE TT SS SS HHHHHHHHHTTT EEE TTT TTHHHHHHHHHHHHHHHT:
ExpBur :eebeeeeeeebbbbbbbbeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbebbbeebbeee:
Contact : cc cc ccc
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