Protein Model on 4li0 assembly_id=1
(TEMPLATE: 
4li0
assembly_id:1
)Protein Model on 4li0 assembly_id=1
(TEMPLATE: 4li0
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [171 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [64 aa] | Guanine nucleotide exchange factor for Rab-3A :R3GEF_HUMAN | 10K 37Y(F) 43A(I) 44D 45F 46L(K) 47T(I) 60Q 62W 73L(I) 75V(T) 76A 77F(Y) 79R (identity: 50.0 %/41.9 %) | |
| 3 | c | F 1 (F) | polymer(polypeptide(L)) [69 aa] | Guanine nucleotide exchange factor for Rab-3A :R3GEF_HUMAN | 40T 41I 69R 70F 71Q(R) 72S(T) 73L(I) (identity: 57.1 %/41.9 %) | |
| 4 | d | G 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 18G 19V 20G 21K 22T 23S(C) 125N 126K 128D 129L(V) 155S 156A 157K (identity: 85.7 %/41.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4li0_A_1 identity=41.9% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******** * *** ** * *********** * **** ** * * * * :
4li0_A_1 10:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 109
SecStr :EEEEEEEE TTSSHHHHHHHHTT S STTTTSEEEEEEEEEETTEEEEEEEEEE GGGHHHHHHHHHH SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebebbbbbeeebbbbebbbebbeeeeeeeebeeebbbeeeeebebeeebbebebebbeeeeeebeebbebbeebebbbbbbbbeeeebbeebeebbeebe:
Contact : b d dddddd b cc bbbbb b b ccccb bbb b
Contact : c
queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: ** * * **** * *** * * ***** **** ** * ** :
4li0_A_1 110:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 170
SecStr :HHS T-T EE---EEEEE TT TT S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH:
ExpBur :eebee-ebee---bbbbbebebeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbbbbbee:
Contact : dd dd ddd
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