Protein Model on 4lhx assembly_id=1
(TEMPLATE: 
4lhx
assembly_id:1
)Protein Model on 4lhx assembly_id=1
(TEMPLATE: 4lhx
assembly_id:1
)| CurrentView:JAVA Change to:[HTML5] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [175 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [76 aa] | Rab-3A-interacting protein :RAB3I_HUMAN | 10K 35N(S) 37Y(F) 43A(I) 44D 45F 46L(K) 47T(I) 62W 73L(I) 76A 77F(Y) 79R 80G (identity: 50.0 %/41.9 %) | |
| 3 | c | F 1 (F) | polymer(polypeptide(L)) [76 aa] | Rab-3A-interacting protein :RAB3I_HUMAN | 36Q(T) 37Y(F) 40T 41I 69R 70F 71Q(R) 72S(T) 73L(I) 79R (identity: 50.0 %/41.9 %) | |
| 4 | d | G 1 (A) | non-polymer(SO4) | SULFATE ION | 16D 17S 18G 19V 20G 21K 22T (identity: 100.0 %/41.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4lhx_A_1 identity=41.9% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******** * *** ** * *********** * **** ** * * * * :
4lhx_A_1 10:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 109
SecStr :EEEEEEE TTS HHHHHHHHTT S STTTTSEEEEEEEEEETTEEEEEEEEEE GGGHHHHHHHHHT SEEEEEEETT HHHHHHHHHHHHHHH:
ExpBur :ebebbbbbeeebebbebbbebbeeeeeeeebeeebbbeeeeebebeeebbebebebbeeeeeeeeebeeebeebebbbbbbbbeeeebbeebeebbeebe:
Contact : b ddddddd bcb cc bbbbb b ccccb bb bb
Contact : c c c
queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: ** * * **** * *** * * ***** **** ** * ** :
4lhx_A_1 110:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 170
SecStr :HHS T-T EE---EEEEETTT GGG S HHHHHHHHHHT-T EEEE BTTTTBSHHHHHHHHHHH:
ExpBur :eebee-ebee---bbbbbebebeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbbbbbee:
|
[help]