Protein Model on 4iru assembly_id=1
(TEMPLATE: 
4iru
assembly_id:1
)Protein Model on 4iru assembly_id=1
(TEMPLATE: 4iru
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [296 aa] | LepB :Q5ZSM7_LEGPH | ||
| 2 | b | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [170 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
| 3 | c | G 1 (A) | non-polymer(ACT) | ACETATE ION | ||
| 4 | d | H 1 (A) | non-polymer(ACT) | ACETATE ION | ||
| 5 | e | I 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 6 | f | J 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 7 | g | K 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 8 | h | L 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 9 | i | M 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 10 | j | N 1 (A) | non-polymer(GOL) | GLYCEROL | ||
| 11 | k | O 1 (A) | non-polymer(K) | POTASSIUM ION | ||
| 12 | l | P 1 (A) | non-polymer(K) | POTASSIUM ION | ||
| 13 | m | Q 1 (A) | non-polymer(K) | POTASSIUM ION | ||
| 14 | n | R 1 (A) | non-polymer(K) | POTASSIUM ION | ||
| 15 | o | S 1 (B) | non-polymer(MG) | MAGNESIUM ION | ||
| 16 | p | T 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| 17 | q | U 1 (B) | non-polymer(AF3) | ALUMINUM FLUORIDE | ||
| 18 | r | V 1 (B) | non-polymer(ACT) | ACETATE ION | ||
| 19 | s | W 1 (B) | non-polymer(ACT) | ACETATE ION | ||
| 20 | t | X 1 (B) | non-polymer(GOL) | GLYCEROL | ||
| 21 | u | Y 1 (B) | non-polymer(K) | POTASSIUM ION | ||
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:4iru_B_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * * :
4iru_B_1 18:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 117
SecStr :EEEEEEEESTTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHHTSTT SEEEEEEETT HHHHHHHHHHHHHHH:
ExpBur :ebebbbbbeeebbbeebbebbbeeeeeeeeeebebeeeeeeebebeeeebebebbbbbbbeebbeebbeebeebebbbbbbbbeeeebbeebeebbebbe:
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * **** * * *:
4iru_B_1 118:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFUTUA: 176
SecStr :HHS ----TT B EEEE TT TTT S HHHHHHHHHHTT EEE TTT TTHHHHHHHHH:
ExpBur :eebe----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbbbbbeeeeebeebbeebb:
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