Protein Model on 4i1o assembly_id=1
(TEMPLATE: 
4i1o
assembly_id:1
)Protein Model on 4i1o assembly_id=1
(TEMPLATE: 4i1o
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [177 aa] | Ras-related protein Rab-1B :RAB1B_HUMAN | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [281 aa] | LepB :Q5ZSM7_LEGPH | 17S 18G 35N(E) 36Q(S) 37Y 38K(I) 39A(S) 40T 41I 42G 43A(V) 44D 45F 60Q 67Q 69R 70F 73L(I) 77F(Y) (identity: 63.2 %/40.3 %) | |
| 3 | c | I 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T 63D 64T (identity: 75.0 %/40.3 %) | |
| 4 | d | J 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 36Q(S) 37Y 38K(I) 40T 63D 125N 126K 128D 129L 155S 156A 157K (identity: 75.0 %/40.3 %) | |
| 5 | e | K 1 (A) | non-polymer(BEF) | BERYLLIUM TRIFLUORIDE ION | 17S 18G 21K 39A(S) 40T 66G (identity: 83.3 %/40.3 %) | |
| 6 | f | L 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | 33F(Y) 35N(E) 37Y 157K (identity: 50.0 %/40.3 %) | |
| 7 | g | S 1 (D) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4i1o_A_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * :
4i1o_A_1 9:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID: 108
SecStr :EEEEEEE STTSSHHHHHHHHHHS SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHGGGTTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebebbbbbbeebbbeebbbbbeeeeeeeeeeebebeeeeeeebebeebebebebbbbbbbeebeeebbeebeebebbbbbbbbeeeebbeebeebbebbe:
Contact : bbdddcd d bbbbbbbbbbb b cc eb bb b b
Contact : dd ed f fdddec d
Contact : ee f d
Contact : e
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * ****** * *:
4i1o_A_1 109:RYAS----ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 167
SecStr :HHS ----TT EEEEEEE TT TTT S HHHHHHHHHTTT EEE SSS TTHHHHHHHHH:
ExpBur :eebe----eebbebbbbbeeeeeeeeebebeebbeebeeeebeebbbbbeeeeebeebbebbb:
Contact : dd dd ddd
Contact : f
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