Protein Model on 4hay assembly_id=1
(TEMPLATE: 
4hay
assembly_id:1
)Protein Model on 4hay assembly_id=1
(TEMPLATE: 4hay
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [200 aa] | GTP-binding nuclear protein Ran :RAN_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [121 aa] | Ran-specific GTPase-activating protein 1 :YRB1_YEAST | 27Q(R) 30N(T) 31K(G) 32K(E) 49E(V) 50V(F) 162V(F) 163E (identity: 12.5 %/34.2 %) | |
| 3 | c | C 1 (C) | polymer(polypeptide(L)) [1014 aa] | Exportin-1 :XPO1_YEAST:XPO1_YEAST | 43A(V) 45F(V) 62W 69R(K) 72S(G) 73L 74G(R) 75V(D) 76A(G) 77F(Y) 79R(I) 80G(Q) 97K 101S(N) 104D(R) 113R 114D(V) 116E 136T(A) 137K 144Y(H) 145S(R) 146K 148N 150P(Q) 151Y 153E(D) 160I(Y) 161N 172N(K) (identity: 33.3 %/34.2 %) | |
| 4 | d | D 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D 17S(G) 18G 19V(T) 20G 21K 22T 23S(T) 33F 34S(E) 35N(K) 36Q(K) 37Y 39A 40T 65A 66G 67Q 125N 126K 128D 129L(I) 155S 156A 157K (identity: 72.0 %/34.2 %) | |
| 5 | e | E 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T 40T 63D (identity: 100.0 %/34.2 %) | |
| 6 | f | F 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 98T(N) 101S(N) 104D(R) 105E(D) (identity: 0.0 %/34.2 %) | |
| 7 | g | G 1 (C) | non-polymer(LMB) | Leptomycin B, bound form | ||
| 8 | h | H 1 (C) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 9 | i | I 1 (C) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 10 | j | J 1 (C) | non-polymer(EDO) | 1,2-ETHANEDIOL | 172N(K) (identity: 0.0 %/34.2 %) | |
| 11 | k | K 1 (C) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 12 | l | L 1 (C) | non-polymer(CL) | CHLORIDE ION | ||
| 13 | m | M 1 (C) | non-polymer(CL) | CHLORIDE ION | ||
| 14 | n | N 1 (C) | non-polymer(CL) | CHLORIDE ION | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4hay_A_1 identity=34.2% |
queryA 7:VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
:* * ** * *** * * ** * ******* * * * * * **** * * * :
4hay_A_1 9:VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL: 108
SecStr : EEEEEEEE TTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGG TTGGGGGTT EEEEEEETTBHHHHHTHHHHHHHH:
ExpBur :eebbbbbbbbeebbbbbbbebbeeeeebeeeeebebeeeeebebebeeeebebebebbbbeeeebeeeeebbeebebbbbbbbbeeeebbebbeebbeeb:
Contact : dddddddd b bbbddddd dd c c bb ce ddd c cccccc cc cf c cf
Contact : e e f f
queryA 107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
: * ** * * *** * * * * * * * *** * * * ** :
4hay_A_1 109:V-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 169
SecStr :H-----HH S EEEEEE TTSSS S GGG --HHHHHT EEEE TTT TTTTHHHHHHHHHHH:
ExpBur :e-----eebeebbbbbbbbeeeeeeeebeeeebe--bbeeeebebbebbbeeeebeeebbbbbbeeee:
Contact : cc c dd dd cc ccc c cc c ddd ccbb c
Contact : j
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