Protein Model on 3tw8 assembly_id=1
(TEMPLATE: 
3tw8
assembly_id:1
)Protein Model on 3tw8 assembly_id=1
(TEMPLATE: 3tw8
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [343 aa] | DENN domain-containing protein 1B :DEN1B_HUMAN | 10K 12I(L) 17S 36Q(S) 37Y 38K(I) 39A(T) 40T 41I 42G 43A(V) 44D 45F 62W 64T 65A 66G 69R 70F 71Q(R) 72S(T) 73L(I) 74G(T) 75V(S) 76A(T) 77F(Y) 79R 80G 81A(T) 114D(N) (identity: 53.3 %/37.4 %) | |
| 2 | b | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [169 aa] | Ras-related protein Rab-35 :RAB35_HUMAN | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:3tw8_B_1 identity=37.4% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * * ******* ** * *** ** * * *********** *** * *** * * * :
3tw8_B_1 9:LFKLLIIGDSGVGKSSLLLRFADNTXXXSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-: 107
SecStr :EEEEEEE TTS HHHHHHHH S --- TTTTSEEEEEEEEEETTEEEEEEEEEETTGGG SS GGGGTT SEEEEEEETT HHHHHHHHHHHHHH-:
ExpBur :ebebbbbbbeebbbeebbeebbeee---eebeeeeebebebeeeeeeeebebbbebeebbeeeeebeeeebeebebbbbbbbbeeeebbebbeebbeeb-:
Contact : a a a aaaaaaaaaa a aaa aaaaaaaaa aaa
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK: 175
: *** * * * * ******* *** * * * :
3tw8_B_1 108:----NQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR: 171
SecStr :----HHH TTSEEEEEEE TT GGG S HHHHHHHHHHHT EEE BTTTTBSHHHHHHHHHHHHHH:
ExpBur :----eeebeebbbbbbbbeeeeeeeeebeeeebeebbeebebebbbbbbeeeeebeebbebbbebbbe:
Contact : a
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