Protein Model on 3tso assembly_id=1 (TEMPLATE: 3tso assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [169 aa] Ras-related protein Rab-25 :RAB25_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [167 aa] Ras-related protein Rab-25 :RAB25_HUMAN
3 c C 1 (C) polymer(polypeptide(L)) [54 aa] Rab11 family-interacting protein 2 :RFIP2_HUMAN 38K(R) 41I 42G 43A(V) (identity: 50.0 %/39.6 %)
4 d D 1 (D) polymer(polypeptide(L)) [54 aa] Rab11 family-interacting protein 2 :RFIP2_HUMAN 30N(R) 41I 42G 43A(V) 44D(E) 45F 46L(S) 47T 62W 69R 72S(A) 73L(I) 76A 77F(Y) (identity: 50.0 %/39.6 %)
5 e E 1 (A) non-polymer(MG) MAGNESIUM ION 22T 40T 63D (identity: 100.0 %/39.6 %)
6 f F 1 (A) non-polymer(GNP) PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 17S 18G 19V 20G 21K 22T 23S(N) 33F 34S 35N(H) 36Q(D) 37Y(S) 39A(T) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 73.9 %/39.6 %)
7 g G 1 (A) non-polymer(GOL) GLYCEROL 27Q(R) 31K(N) 32K(E) 33F (identity: 25.0 %/39.6 %)
8 h H 1 (A) non-polymer(GOL) GLYCEROL 40T 41I 42G 67Q(L) 69R 71Q(R) (identity: 66.7 %/39.6 %)
9 i I 1 (A) non-polymer(GOL) GLYCEROL 14L(I) 64T 65A 67Q(L) 71Q(R) 74G(T) 77F(Y) 78Y 102W 105E (identity: 50.0 %/39.6 %)
10 j J 1 (A) non-polymer(PO4) PHOSPHATE ION 163E 164Q(L) 167Q(E) (identity: 33.3 %/39.6 %)
11 k K 1 (A) non-polymer(PO4) PHOSPHATE ION 96F(Y) 97K(A) 99L(V) 100D(E) 142W(F) (identity: 0.0 %/39.6 %)
12 l L 1 (B) non-polymer(MG) MAGNESIUM ION
13 m M 1 (B) non-polymer(GNP) PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
14 n N 1 (B) non-polymer(GOL) GLYCEROL
15 o O 1 (B) non-polymer(GOL) GLYCEROL
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3tso_A_1 identity=39.6%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :  **   * ****** *        **     ***  * *  **     *  ******* **      * ****    **** *   *      *  *  :
3tso_A_1      10:VFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELY: 109
SecStr          :EEEEEEES TTSSHHHHHHHHHHS          SEEEEEEEEEETTEEEEEEEEEE    S  TTHHHHHTT  EEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbebbbbbbbeeeeeeeeeebeeeeebeeebebeebebebebebbbbeeeebeebeebbeebebbbbbbbbbeeebbebbeebbeebe:    
Contact         :      i  fffffef   g  dggfffffcfecccdddd              deiffh d hddi ddi                 kk kk i  i  
Contact         :              f          g      fddd                     i i h i     i                              
Contact         :                                hhh                                                                 

queryA       108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :  *             *** **   * * *  *       *     ****    *** ** *   :
3tso_A_1     110:DHAEA----TIVVMLVGNKSDLSQAREVPTEEARMFA-ENNGLLFLETSALDSTNVELAFETVLK: 169
SecStr          :TSS T----T EEEEEEE GGGGGG  S HHHHHHHH-HHHT EEEE  TTT TTHHHHHHHHHH:    
ExpBur          :eeeee----ebbbbbbbbebeeeeeeebeeeebeeeb-eeeebebbbbbbeeeeebeebbebbbe:    
Contact         :                 ff ff             k            fff     jj  j                                       


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