Protein Model on 3tso assembly_id=1
(TEMPLATE: 
3tso
assembly_id:1
)Protein Model on 3tso assembly_id=1
(TEMPLATE: 3tso
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [169 aa] | Ras-related protein Rab-25 :RAB25_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [167 aa] | Ras-related protein Rab-25 :RAB25_HUMAN | ||
| 3 | c | C 1 (C) | polymer(polypeptide(L)) [54 aa] | Rab11 family-interacting protein 2 :RFIP2_HUMAN | 38K(R) 41I 42G 43A(V) (identity: 50.0 %/39.6 %) | |
| 4 | d | D 1 (D) | polymer(polypeptide(L)) [54 aa] | Rab11 family-interacting protein 2 :RFIP2_HUMAN | 30N(R) 41I 42G 43A(V) 44D(E) 45F 46L(S) 47T 62W 69R 72S(A) 73L(I) 76A 77F(Y) (identity: 50.0 %/39.6 %) | |
| 5 | e | E 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T 40T 63D (identity: 100.0 %/39.6 %) | |
| 6 | f | F 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 17S 18G 19V 20G 21K 22T 23S(N) 33F 34S 35N(H) 36Q(D) 37Y(S) 39A(T) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 73.9 %/39.6 %) | |
| 7 | g | G 1 (A) | non-polymer(GOL) | GLYCEROL | 27Q(R) 31K(N) 32K(E) 33F (identity: 25.0 %/39.6 %) | |
| 8 | h | H 1 (A) | non-polymer(GOL) | GLYCEROL | 40T 41I 42G 67Q(L) 69R 71Q(R) (identity: 66.7 %/39.6 %) | |
| 9 | i | I 1 (A) | non-polymer(GOL) | GLYCEROL | 14L(I) 64T 65A 67Q(L) 71Q(R) 74G(T) 77F(Y) 78Y 102W 105E (identity: 50.0 %/39.6 %) | |
| 10 | j | J 1 (A) | non-polymer(PO4) | PHOSPHATE ION | 163E 164Q(L) 167Q(E) (identity: 33.3 %/39.6 %) | |
| 11 | k | K 1 (A) | non-polymer(PO4) | PHOSPHATE ION | 96F(Y) 97K(A) 99L(V) 100D(E) 142W(F) (identity: 0.0 %/39.6 %) | |
| 12 | l | L 1 (B) | non-polymer(MG) | MAGNESIUM ION | ||
| 13 | m | M 1 (B) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | ||
| 14 | n | N 1 (B) | non-polymer(GOL) | GLYCEROL | ||
| 15 | o | O 1 (B) | non-polymer(GOL) | GLYCEROL | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3tso_A_1 identity=39.6% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
: ** * ****** * ** *** * * ** * ******* ** * **** **** * * * * :
3tso_A_1 10:VFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELY: 109
SecStr :EEEEEEES TTSSHHHHHHHHHHS SEEEEEEEEEETTEEEEEEEEEE S TTHHHHHTT EEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbebbbbbbbeeeeeeeeeebeeeeebeeebebeebebebebebbbbeeeebeebeebbeebebbbbbbbbbeeebbebbeebbeebe:
Contact : i fffffef g dggfffffcfecccdddd deiffh d hddi ddi kk kk i i
Contact : f g fddd i i h i i
Contact : hhh
queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
: * *** ** * * * * * **** *** ** * :
3tso_A_1 110:DHAEA----TIVVMLVGNKSDLSQAREVPTEEARMFA-ENNGLLFLETSALDSTNVELAFETVLK: 169
SecStr :TSS T----T EEEEEEE GGGGGG S HHHHHHHH-HHHT EEEE TTT TTHHHHHHHHHH:
ExpBur :eeeee----ebbbbbbbbebeeeeeeebeeeebeeeb-eeeebebbbbbbeeeeebeebbebbbe:
Contact : ff ff k fff jj j
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