Protein Model on 3tkl assembly_id=1
(TEMPLATE: 
3tkl
assembly_id:1
)Protein Model on 3tkl assembly_id=1
(TEMPLATE: 3tkl
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [171 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [192 aa] | LidA protein, substrate of the Dot/Icm system :A5IFX1_LEGPC | 41I 42G 43A(V) 44D 45F 47T(I) 58T(K) 60Q 69R 70F 72S(T) 73L(I) 76A(S) 77F(Y) 100D(K) 104D(Q) 107L(D) 108I(R) (identity: 38.9 %/40.3 %) | |
| 3 | c | C 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T 63D (identity: 66.7 %/40.3 %) | |
| 4 | d | D 1 (A) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 35N(E) 37Y 39A(S) 40T 65A 66G 67Q 125N 126K 128D 129L 155S 156A 157K (identity: 78.3 %/40.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3tkl_A_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * * :
3tkl_A_1 16:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 115
SecStr :EEEEEEE STTSSHHHHHHHHHHS S SSEEEEEEEEEETTEEEEEEEEEE SGGG TTHHHHHTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbeebbebbbeeeeeeeeeeeeeeeeeeeebebeeeebebebebbbbeeeebeebeebbeebebbbbbbbbeeeebbeebeebbebbe:
Contact : ddddddcd d d d dcbbbbb b b b c ddd bb bb bb b b b
Contact : d d
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * **** * * *:
3tkl_A_1 116:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 174
SecStr :HHS ----TT EEEEEEE TT TTT S HHHHHHHHHHTT EEEE TTT TTHHHHHHHHH:
ExpBur :eebe----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbbbbbeeeeebeebbebbb:
Contact :b dd dd ddd
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