Protein Model on 3sfv assembly_id=1
(TEMPLATE: 
3sfv
assembly_id:1
)Protein Model on 3sfv assembly_id=1
(TEMPLATE: 3sfv
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [179 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [342 aa] | LidA protein, substrate of the Dot/Icm system :A5IFX1_LEGPC | 8L 17S 18G 30N(D) 33F(Y) 34S(T) 36Q(S) 37Y 38K(I) 39A(S) 41I 42G 43A(V) 44D 45F 47T(I) 58T(K) 60Q 62W 67Q 69R 70F 72S(T) 73L(I) 76A(S) 77F(Y) 79R 91T 92A(D) 101S(Q) 104D(Q) 107L(D) 108I(R) 109Q(Y) 126K (identity: 45.7 %/40.3 %) | |
| 3 | c | C 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(N) 23S(C) 33F(Y) 34S(T) 35N(E) 36Q(S) 37Y 125N 126K 128D 129L 155S 156A 157K (identity: 70.0 %/40.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3sfv_A_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * * :
3sfv_A_1 16:LFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 115
SecStr :EEEEEEESSTTSSHHHHHHHHHH SS SS EEEEEEEEETTEEEEEEEEE SGGG TTHHHHTTT EEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbeebbebbbeeeeeeeeeeeeeeeeeeeebebeeebbebebbbbbeeeeebeebeeebeebebbbbbbbbeeeebbeebeebbebbe:
Contact :b cbbccccc b bbcbbbb bbbbb b b b b b bb bb bb b bb b b b
Contact : cc cc cc
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * **** * * *:
3sfv_A_1 116:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 174
SecStr :HHS ----TT EEEEEEE TT GGG S HHHHHHHHHHHT EEE TTT TTHHHHHHHHH:
ExpBur :eebe----eebbebbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbebbb:
Contact :bb cb cc ccc
Contact : c
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