Protein Model on 3nkv assembly_id=1
(TEMPLATE: 
3nkv
assembly_id:1
)Protein Model on 3nkv assembly_id=1
(TEMPLATE: 3nkv
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [170 aa] | Ras-related protein Rab-1B :RAB1B_HUMAN | |
| 2 | b | C 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 34S(T) 35N(E) 36Q(S) 37Y 39A(S) 40T 64T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 72.0 %/40.3 %) | |
| 3 | c | D 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T (identity: 50.0 %/40.3 %) | |
| 4 | d | E 1 (A) | non-polymer(BA) | BARIUM ION | 41I 43A(V) 44D (identity: 66.7 %/40.3 %) | |
| 5 | e | F 1 (A) | non-polymer(AMP) | ADENOSINE MONOPHOSPHATE | 43A(V) 45F 60Q 62W 77F(Y) (identity: 60.0 %/40.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3nkv_A_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * :
3nkv_A_1 9:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID: 108
SecStr :EEEEEEEESTTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTTTTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebebbbbbbeebbbebbbebbeeeeeeeeeeebebbeeeeeebebeeebbebebbbbbbeeebeeebbeebeebebbbbbbbbeeeebbebbeebbebbe:
Contact : bbbbbbbb bbbbb bbd dde e e bbb e
Contact : c c e
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * ****** * *:
3nkv_A_1 109:RYAS----ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 167
SecStr :HHS ----TT EEEEEEE TT TTT S HHHHHHHHHHHT EEE TTT TTHHHHHHHHH:
ExpBur :eebe----eebbebbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeebb:
Contact : bb bb bbb
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