Protein Model on 3cue assembly_id=1 (TEMPLATE: 3cue assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description f(query A)
1 a A 1 (A) polymer(polypeptide(L)) [159 aa] Transport protein particle 23 kDa subunit :TRS23_YEAST 8L 10K 41I 45F 47T(I) 58T(K) 60Q 62W 76A(S) 80G (identity: 70.0 %/38.1 %)
2 b B 1 (B) polymer(polypeptide(L)) [167 aa] Transport protein particle 31 kDa subunit :TRS31_YEAST
3 c C 1 (C) polymer(polypeptide(L)) [143 aa] Transport protein particle 18 kDa subunit :BET5_YEAST 41I 68E (identity: 100.0 %/38.1 %)
4 d D 1 (D) polymer(polypeptide(L)) [186 aa] Transport protein particle 22 kDa subunit :BET3_YEAST 75V(S) 76A(S) 79R (identity: 33.3 %/38.1 %)
5 e E 1 (E) polymer(polypeptide(L)) [188 aa] Transport protein particle 22 kDa subunit :BET3_YEAST 17S 19V 21K 22T(S) 37Y 39A(S) 65A (identity: 71.4 %/38.1 %)
6 f A(RAB7A_HUMAN) F 1 (F) polymer(polypeptide(L)) [166 aa] GTP-binding protein YPT1 :YPT1_YEAST
7 g Y 1 (E) non-polymer(PLM) PALMITIC ACID
ALIGNMENTS
MODEL[6] Protein A "queryA" TEMPLATE:3cue_F_1 identity=38.1%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    * *****  *            *  *** **  * *  *   *  ***********       ***      * ***    *     *  *  :
3cue_F_1       8:LFKLLLIGNSGVGKSCLLLRFSDDXXXXXYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEID: 107
SecStr          :EEEE     TTS HHHHHHTTS  -----    SS  EEEEEEEETTEEEEEEEE    SSTHHHHHHHHSSS SBEEEE  SS THHHHHHHHHHHHHH:    
ExpBur          :ebebbbbbeeebebeeebeeebee-----eeeeebbbebebebebeeebbebbbbbbebeeeeeebbeebbeebebbbbbbbbeeeebbebbeebbeebe:    
Contact         :a a      e e ee              e e a   a a          a a a  e  c      da  da                           
Contact         :                                 c                                  d                               

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :  *             *** **    *            *  *  ****    *** ** * **:
3cue_F_1     108:RYATSTVLK----LLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMAR: 167
SecStr          :HHS TT  E----EEE  S S TTS  S HHHHHHHHHHHT  B    SSS THHHHHHHHHHH:    
ExpBur          :eebeeebee----bbbbbebeeeeeeebeeeebeebbeeeebebebbeeeebeebeebbeebbe:    


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