Protein Model on 3cph assembly_id=1
(TEMPLATE: 
3cph
assembly_id:1
)Protein Model on 3cph assembly_id=1
(TEMPLATE: 3cph
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (G) | polymer(polypeptide(L)) [441 aa] | Rab GDP-dissociation inhibitor :GDI1_YEAST | 41I 42G 44D 45F 62W 63D 65A 67Q 69R 70F 72S(T) 74G(T) 75V(T) 76A 77F(Y) 79R (identity: 75.0 %/39.0 %) | |
| 2 | b | A(RAB7A_HUMAN) | B 1 (A) | polymer(polypeptide(L)) [175 aa] | Ras-related protein SEC4 :SEC4_YEAST | |
| 3 | c | D 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 39A(T) (identity: 0.0 %/39.0 %) | |
| 4 | d | E 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F 34S(N) 35N(P) 37Y(F) 38K(I) 39A(T) 68E 125N 126K 128D 129L(M) 155S 156A 157K (identity: 63.6 %/39.0 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:3cph_B_1 identity=39.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
: * ******* * * ** *** ** * * * * ********* * **** ** *** ** * :
3cph_B_1 20:IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW----F: 115
SecStr : EEEEEE STTSSHHHHHHHHHH SSS S EEEEEEEETTEEEEEEEE TTGGGGT HHHHTT SEEEEEEETT HHHHHTHHHH----H:
ExpBur :ebbbbbbbbeebbbbbbbbbbbeeeeeeeeeeeeebeeeeeebebeeeebebebebbeeebeeeebeeebbeebebbbbbbbbeeeebbeebeeb----e:
Contact : ddddddcd ddd ddc aa aa aa a adaa a aaaa a
Contact : d d
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
: *** * * * * * ** * *** ** * * * :
3cph_B_1 116:KTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAK: 178
SecStr :HHHHHHTTT SEEEEEEE TT SS S HHHHHHHH-HHHT EEE BTTTTBSSHHHHHHHHH:
ExpBur :ebbbeebeeebebbbbbbeeeeeeeebeeeebeebb-eebebebbebbbeeeeebeebbeebbe:
Contact : dd dd ddd
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