Protein Model on 3a6p assembly_id=1 (TEMPLATE: 3a6p assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description c(query A)
1 a A 1 (A) polymer(polypeptide(L)) [1072 aa] Exportin-5 :XPO5_HUMAN 43A(V) 44D(E) 45F(V) 62W 69R(K) 72S(G) 73L 75V(D) 76A(G) 77F(Y) 79R(I) 93P(R) 100D(P) 101S(N) 104D(R) 105E(D) 113R 114D(V) 116E 130E(K) 133Q(K) 148N 150P(Q) 152F(Y) 164Q(K) 168T(W) 172N(K) (identity: 18.5 %/34.0 %)
2 b B 1 (B) polymer(polypeptide(L)) [13 aa] 13-mer peptide
3 c A(RAB7A_HUMAN) C 1 (C) polymer(polypeptide(L)) [170 aa] GTP-binding nuclear protein Ran :RAN_CANFA
4 d D 1 (D) polymer(polyribonucleotide) pre-microRNA 137K (identity: 100.0 %/34.0 %)
5 e E 1 (E) polymer(polyribonucleotide) pre-microRNA 135A(K) (identity: 0.0 %/34.0 %)
6 f K 1 (C) non-polymer(GTP) GUANOSINE-5'-TRIPHOSPHATE 16D 17S(G) 18G 19V(T) 20G 21K 22T 23S(T) 33F 34S(E) 35N(K) 36Q(K) 37Y 38K(V) 40T 65A 66G 125N 126K 128D 129L(I) 155S 156A 157K (identity: 66.7 %/34.0 %)
7 g L 1 (C) non-polymer(MG) MAGNESIUM ION 22T 40T 63D (identity: 100.0 %/34.0 %)
ALIGNMENTS
MODEL[3] Protein A "queryA" TEMPLATE:3a6p_C_1 identity=34.0%
queryA         6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
                : *  *    ** * ***          *   * ** *                   ******* *  *    *  * *    ****   * *    *   :
3a6p_C_1       8:QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRD: 107
SecStr          :   EEEEEEE TTSSHHHHHHHHHT     S     SEEEEEEEEEETTEEEEEEEEEE  SGGG SSGGGGGTT  EEEEEEESS HHHHHTHHHHHHH:    
ExpBur          :eeebbbbbbbbeebbbebbbebbeeeeeeeeeeebebbeeeebebebeeeebebbbebbbbeeeeeeeeeebbeebebbbbbbbbeeeebbeebeebbee:    
Contact         :          ffffffff         ffffff f  aaa                ag ff  a  aa aaa a             a      aa  aa
Contact         :                g                 g                                                                 

queryA       106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
                :       *  ** * *  *** *   * *  *        * *  *   ***   * *  *   **   :
3a6p_C_1     108:LV-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 169
SecStr          :HH-----HHSTT  EEEEEE TTSSS SS TTT  --HHHHTT EEEE  TTT TTTTHHHHHHHHHHT:    
ExpBur          :be-----eebeebebbbbbbebeeeeeebeeeebe--bbeeeebebbebbbeeeeeeeebbbbbbeeee:    
Contact         :       aa a        ff ffa  a e d          a a a  fff      a   a   a                                 


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