Protein Model on 2rhd assembly_id=1
(TEMPLATE: 
2rhd
assembly_id:1
)Protein Model on 2rhd assembly_id=1
(TEMPLATE: 2rhd
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [164 aa] | Small GTP binding protein rab1a :Q7YYW6_CRYPV | |
| 2 | b | B 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) (identity: 0.0 %/38.6 %) | |
| 3 | c | C 1 (A) | non-polymer(MG) | MAGNESIUM ION | 94N(D) (identity: 0.0 %/38.6 %) | |
| 4 | d | D 1 (A) | non-polymer(MG) | MAGNESIUM ION | 94N(D) (identity: 0.0 %/38.6 %) | |
| 5 | e | E 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 35N(D) 125N 126K 128D 129L 155S 156A 157K (identity: 76.5 %/38.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2rhd_A_1 identity=38.6% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * ******* **** * *** * * :
2rhd_A_1 9:LFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGXXXXXXXXXSYYRGAHGIIIVYDVTDRDSFDNVKQW-----: 103
SecStr :EEEEEEE STTSSHHHHHHHHHH SS S SSS EEEEEEETTEEEEEEEESS --------- TTTT SEEEEEEETT HHHHHTHHHH-----:
ExpBur :ebebbbbbbeebbbebbbbbbeeeeeeeeeeeebeeeebeeebebeeeebbbbbbbeee---------eebeebebbbbbbbbeeeebbeebeeb-----:
Contact : eeeeeebe e e c
Contact : e d
queryA 108:IQASPRDP-ENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
:** * ** *** ** * * * ***** * ****** * *:
2rhd_A_1 104:IQEIDRYAMENVNKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMA: 167
SecStr :HHHHHHHS TT EEEEEEE TT GGG S HHHHHHHHHHTT EEEE TTT TTHHHHHHHHH:
ExpBur :beebeeebeeebbbbbbbbebeeeeeeebeeeebeebbeeeebeebbbbbeeeebbeebbeebb:
Contact : ee ee eee
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