Protein Model on 2hv8 assembly_id=1
(TEMPLATE: 
2hv8
assembly_id:1
)Protein Model on 2hv8 assembly_id=1
(TEMPLATE: 2hv8
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [169 aa] | Ras-related protein Rab-11A :RB11A_HUMAN | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [169 aa] | Ras-related protein Rab-11A :RB11A_HUMAN | ||
| 3 | c | B 1 (D) | polymer(polypeptide(L)) [54 aa] | Rab11 family-interacting protein 3 :RFIP3_HUMAN | 30N(R) 41I 43A(V) 44D(E) 45F 46L(A) 47T 62W 67Q(L) 69R 71Q(R) 72S(A) 73L(I) 76A 77F(Y) 79R (identity: 43.8 %/42.0 %) | |
| 4 | d | B 2 (D) | polymer(polypeptide(L)) [54 aa] | Rab11 family-interacting protein 3 :RFIP3_HUMAN | 38K 39A(S) 41I (identity: 66.7 %/42.0 %) | |
| 5 | e | G 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T (identity: 50.0 %/42.0 %) | |
| 6 | f | G 2 (A) | non-polymer(MG) | MAGNESIUM ION | ||
| 7 | g | H 1 (A) | non-polymer(SO4) | SULFATE ION | 67Q(L) 68E 69R (identity: 66.7 %/42.0 %) | |
| 8 | h | H 2 (A) | non-polymer(SO4) | SULFATE ION | ||
| 9 | i | I 1 (A) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 37Y(S) 39A(S) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 69.6 %/42.0 %) | |
| 10 | j | I 2 (A) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2hv8_A_1 identity=42.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* ** ******* * * * *** * * ** ******* ** * **** ** * * * * :
2hv8_A_1 8:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 107
SecStr :EEEEEEESSTTSSHHHHHHHHHHS TT SEEEEEEEEEETTEEEEEEEEEE S TTHHHHHTT EEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbebbbbbbbeeeeeeeeeebeeeeeeeeebebeeeebebbbebbbbeeeebeebeebbeebebbbbbbbbebeebbeebeebbebbe:
Contact : iiiiiiei c iii iddec ccccc c iicgc ccc cc c
Contact : i iid g g
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * *** ** * * * * * ** **** *** *****:
2hv8_A_1 108:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 165
SecStr :HHS T----T EEEEEEE TT TTT S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHH:
ExpBur :eebee----ebbbbbbbbeeeeeeeeebeeeebeeeb-eeeebeebbbbbeeeeebeebbeeb:
Contact : ii ii iii
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