Protein Model on 2bcg assembly_id=1
(TEMPLATE: 
2bcg
assembly_id:1
)Protein Model on 2bcg assembly_id=1
(TEMPLATE: 2bcg
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (G) | polymer(polypeptide(L)) [442 aa] | Secretory pathway GDP dissociation inhibitor :GDI1_YEAST | 40T 41I 42G 44D 45F 62W 63D 65A 67Q 69R 70F 72S(T) 74G(T) 75V(S) 76A(S) 77F(Y) 79R 109Q(Y) 110A 111S(T) (identity: 65.0 %/38.8 %) | |
| 2 | b | A(RAB7A_HUMAN) | B 1 (Y) | polymer(polypeptide(L)) [194 aa] | GTP-binding protein YPT1 :YPT1_YEAST | |
| 3 | c | C 1 (G) | non-polymer(GER) | GERAN-8-YL GERAN | ||
| 4 | d | D 1 (G) | non-polymer(GER) | GERAN-8-YL GERAN | ||
| 5 | e | E 1 (Y) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 63D (identity: 50.0 %/38.8 %) | |
| 6 | f | F 1 (Y) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D(N) 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 34S(T) 36Q(D) 37Y 68E 125N 126K 128D 129L 155S 156A 157K(L) (identity: 65.0 %/38.8 %) | |
| 7 | g | G 1 (Y) | non-polymer(TRS) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | 145S(D) (identity: 0.0 %/38.8 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:2bcg_B_1 identity=38.8% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * * ***** * * * *** ** * * * * *********** *** * *** * * * :
2bcg_B_1 8:LFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEID: 107
SecStr :EEEEEEEESTTSSHHHHHHHHHH TT SS EEEEEEEETTEEEEEEEE TTTTTTT GGGGTT SEEEEEEETT HHHHHHHHHHHHHHH:
ExpBur :ebbbbbbbbeebebebbbbbbeeeeeeeeeeeeeebeeeeeebebeeebbebebebbeeebeeeebeeebbeebebbbbbbbbeeeebbebbebbbeebe:
Contact : ffffffef ff ff aaa aa aa a afaa a aaaa a
Contact : f e
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
: * *** ** * * * **** *** ** * **:
2bcg_B_1 108:RYATS----TVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMAR: 167
SecStr :HHS T----T EEEEEEE TT TTT S HHHHHHHHHHTT EEE TTT TTHHHHHHHHHH:
ExpBur :eebee----ebbebbbbbebeeeeeeebeeeebeeebeeeebebebbbbeeeeebeebbeebbe:
Contact : aaa ff ff g fff
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