Protein Model on 1yhn assembly_id=1 (TEMPLATE: 1yhn assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [183 aa] Ras-related protein Rab-7 :RAB7_HUMAN
2 b A 2 (A) polymer(polypeptide(L)) [183 aa] Ras-related protein Rab-7 :RAB7_HUMAN
3 c B 1 (B) polymer(polypeptide(L)) [65 aa] Rab interacting lysosomal protein :RILP_HUMAN 3S 8L 43A 44D 45F 47T 58T 62W 72S 73L 182L 183Y 185E (identity: 100.0 %/99.5 %)
4 d B 2 (B) polymer(polypeptide(L)) [65 aa] Rab interacting lysosomal protein :RILP_HUMAN 8L 10K 38K 41I 60Q 62W 70F 76A 77F 79R 80G 82D 178T 180V 181E 182L 183Y (identity: 100.0 %/99.5 %)
5 e C 1 (A) non-polymer(MG) MAGNESIUM ION 21K 22T 40T 63D 64T (identity: 100.0 %/99.5 %)
6 f C 2 (A) non-polymer(MG) MAGNESIUM ION
7 g D 1 (A) non-polymer(GTP) GUANOSINE-5'-TRIPHOSPHATE 17S 18G 19V 20G 21K 22T 23S 33F 34S 35N 37Y 39A 40T 64T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 100.0 %/99.5 %)
8 h D 2 (A) non-polymer(GTP) GUANOSINE-5'-TRIPHOSPHATE
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1yhn_A_1 identity=99.5%
queryA         3:SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW: 102
                :**************************************************************** ***********************************:
1yhn_A_1       3:SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW: 102
SecStr          :   EEEEEEEEE  TTSSHHHHHHHHHHS   SS     SEEEEEEEEESSS EEEEEEEEE  SGGG     STTSS SEEEEEEETT THHHHTHHHH:    
ExpBur          :eeeebebbbbbbbeeebbbeebbebbbeeeeeeeeeebebeeeeeeeeebeeebbbbbbbbbbbeeeeeeeeeebbeebbbbbbbbbbbeeebbeebeeb:    
Contact         :c    c d      ggggeeg         ggg gdged ccc c          c d ceegg   d cc  dd dd d                    
Contact         :     d            gg                 g                     d g                                      

queryA       103:RDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNE: 185
                :***********************************************************************************:
1yhn_A_1     103:RDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNE: 185
SecStr          :HHHHHHHH  SSGGG  EEEEEE TTSS   S HHHHHHHHHHTT   EEE BTTTTBSHHHHHHHHHHHHHTTT  EE S  :    
ExpBur          :beebbeebeeeeeeebbbbbbbbeebeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbebbbebbbeeeebeeeeee:    
Contact         :                      gg gg                         ggg                    d ddcc c                 
Contact         :                                                                               dd                   


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