Protein Model on 1r2q assembly_id=1
(TEMPLATE: 
1r2q
assembly_id:1
)Protein Model on 1r2q assembly_id=1
(TEMPLATE: 1r2q
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [170 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
| 2 | b | B 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T (identity: 50.0 %/43.7 %) | |
| 3 | c | C 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D(E) 17S 18G(A) 19V 20G 21K 22T(S) 23S 33F 34S(H) 35N(E) 37Y(Q) 39A(S) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 69.6 %/43.7 %) | |
| 4 | d | D 1 (A) | non-polymer(GOL) | GLYCEROL | 18G(A) 37Y(Q) (identity: 0.0 %/43.7 %) | |
| 5 | e | E 1 (A) | non-polymer(GOL) | GLYCEROL | 91T (identity: 100.0 %/43.7 %) | |
| 6 | f | F 1 (A) | non-polymer(GOL) | GLYCEROL | 94N(E) 97K(A) 98T(R) 101S(N) (identity: 0.0 %/43.7 %) | |
| 7 | g | G 1 (A) | non-polymer(GOL) | GLYCEROL | 108I(R) 109Q (identity: 50.0 %/43.7 %) | |
| 8 | h | H 1 (A) | non-polymer(GOL) | GLYCEROL | 89D 91T 126K 129L (identity: 100.0 %/43.7 %) | |
| 9 | i | I 1 (A) | non-polymer(GOL) | GLYCEROL | 107L(Q) 112P 118F(I) 120F(I) 147N 148N(S) (identity: 33.3 %/43.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1r2q_A_1 identity=43.7% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
: * ** * *** ** * * **** *** * ** * ********* ** **** * * * * * * :
1r2q_A_1 7:FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 106
SecStr :EEEEEE STTSSHHHHHHHHHHS TT SSEEEEEEEEEETTEEEEEEEEEE SGGGGGGHHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH:
ExpBur :bbbbbbbeeebbbbbbbbebbeeeeeeeeeebebeeeeeeebebeebebebebebbbbeeebeeebeebbeebebbbbbbbbeeeebbebbeebbebbee:
Contact : ccccccbc ccc c cb cc h e f ff f ig
Contact : d c d c h
queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
:**** * *** ** * * * ** * ***** ** * ** :
1r2q_A_1 107:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK: 165
SecStr :HS T----T EEEEEEE GGGGGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHH:
ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebebbbbeeeeebeebbbebbe:
Contact :g i i i cc cc e ii ccc
Contact : h h h
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