Protein Model on 1ky3 assembly_id=1
(TEMPLATE: 
1ky3
assembly_id:1
)Protein Model on 1ky3 assembly_id=1
(TEMPLATE: 1ky3
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [162 aa] | GTP-BINDING PROTEIN YPT7P :YPT7_YEAST | |
| 2 | b | B 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T (identity: 100.0 %/62.1 %) | |
| 3 | c | C 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T 23S 33F(Y) 125N 126K 128D 155S 156A 157K (identity: 93.3 %/62.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1ky3_A_1 identity=62.1% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
: ***************** *** * * ** ********** ** * *** **** ************ *** * ******:
1ky3_A_1 8:ILKVIILGDSGVGKTSLMHRYVNDKYSQQYXXXIGADFLTKEVTVDGDKVATMQVWDTAXXXXXXXXXXAFYRGADCCVLVYDVTNASSFENIKSWRDEF: 107
SecStr :EEEEEEE TTSSHHHHHHHHHHS TT --- S EEEEE SSS EEEEEE ---------- STT EEEEEEETT HHHHHTHHHHHHHH:
ExpBur :ebbbbbbbbeebbbeebbbbbbeeeeeeee---eeeeebeeebeeeeeeebebbbbbee----------eeeeebbbbbbbbbbeeeebbeebeeebeeb:
Contact : ccccccbc c
Contact : c
queryA 107:LIQASPRDPENFPFVVLGNKIDLENRQ--VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
:* * ** **** ****** * * * ** * ** * **** **** ** *** ** *:
1ky3_A_1 108:LVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ: 179
SecStr :HHHH S TTT EEEEEE TTS GGG S HHHHHHHHHHTTS EEEEBTTTTBSHHHHHHHHHHHHHHH:
ExpBur :eeebebeeeeebbbbbbbbeeebeeeeeebeeeebeebbeebeebebbbbbbeeeeebeebbebbbebbeee:
Contact : cc c ccc
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