Protein Model on 1k5d assembly_id=1
(TEMPLATE: 
1k5d
assembly_id:1
)Protein Model on 1k5d assembly_id=1
(TEMPLATE: 1k5d
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [206 aa] | GTP-binding nuclear protein RAN :RAN_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [146 aa] | Ran-specific GTPase-activating protein :RANG_HUMAN | 7V 9L(F) 27Q(R) 30N(T) 31K(G) 32K(E) 49E(V) 50V(F) 53D(N) 54D(R) 55R(G) 117N 118F(I) 119P 144Y(H) 145S(R) 148N 149I(L) 163E 168T(W) 172N(K) 173A(L) 174L(I) (identity: 21.7 %/34.0 %) | |
| 3 | c | C 1 (C) | polymer(polypeptide(L)) [344 aa] | Ran GTPase activating protein 1 :RNA1_SCHPO | 16D 18G 36Q(K) 37Y 39A 40T 41I(L) 42G 44D(E) 67Q 68E 69R(K) 73L 77F(Y) 92A(S) 93P(R) 94N(V) 126K 131N(D) 133Q(K) (identity: 50.0 %/34.0 %) | |
| 4 | d | M 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T 40T (identity: 100.0 %/34.0 %) | |
| 5 | e | N 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 17S(G) 18G 19V(T) 20G 21K 22T 23S(T) 33F 34S(E) 35N(K) 37Y 39A 40T 64T 65A 66G 67Q 125N 126K 128D 129L(I) 155S 156A 157K (identity: 75.0 %/34.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1k5d_A_1 identity=34.0% |
queryA 6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
: * * ** * *** * * ** * ******* * * * * * **** * * * :
1k5d_A_1 8:QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRD: 107
SecStr : EEEEEEEEE TTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SSS SSGGGHHHHTT EEEEEEETT HHHHHTHHHHHHH:
ExpBur :eeebbbbbbbbeebbbeebbebbeeeeeeeeeeebeeeeeeebebebeeeebebebebbbbeeeeeeebeebbeebebbbbbbbbeeeebbeebeebbeb:
Contact : b b ceceeede b bbbeeecc cccc c bb bbb eeeccc c c ccc
Contact : e e e ed e
Contact : e
queryA 106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
: * ** * * *** * * * * * * * *** * * * ** :
1k5d_A_1 108:LV-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 169
SecStr :HH-----HHH S EEEEEE TTSSS S TTT --HHHHTT EEEE TTT TTTTHHHHHHHHHHH:
ExpBur :be-----eebeebebbbbbbebeeeeeebeeeebe--bbeeeebebbbbbbeeeebeeebbbbbbeeee:
Contact : bbb ec ee c c bb bb eee b b bbb
Contact : e
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