Protein Model on 1g16 assembly_id=1
(TEMPLATE: 
1g16
assembly_id:1
)Protein Model on 1g16 assembly_id=1
(TEMPLATE: 1g16
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | d(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [159 aa] | RAS-RELATED PROTEIN SEC4 :SEC4_YEAST | ||
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [161 aa] | RAS-RELATED PROTEIN SEC4 :SEC4_YEAST | 53D(N) 54D(G) (identity: 0.0 %/37.1 %) | |
| 3 | c | C 1 (C) | polymer(polypeptide(L)) [167 aa] | RAS-RELATED PROTEIN SEC4 :SEC4_YEAST | 148N(G) 150P 151Y(F) 152F(I) 153E 161N 164Q(E) 167Q(F) 168T 171R(K) (identity: 40.0 %/37.1 %) | |
| 4 | d | A(RAB7A_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [160 aa] | RAS-RELATED PROTEIN SEC4 :SEC4_YEAST | |
| 5 | e | E 1 (A) | non-polymer(CO) | COBALT (II) ION | ||
| 6 | f | F 1 (A) | non-polymer(CO) | COBALT (II) ION | ||
| 7 | g | G 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| 8 | h | H 1 (B) | non-polymer(CO) | COBALT (II) ION | ||
| 9 | i | I 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| 10 | j | J 1 (C) | non-polymer(CO) | COBALT (II) ION | ||
| 11 | k | K 1 (C) | non-polymer(CO) | COBALT (II) ION | ||
| 12 | l | L 1 (C) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| 13 | m | M 1 (D) | non-polymer(CO) | COBALT (II) ION | 22T(S) 63D (identity: 50.0 %/37.1 %) | |
| 14 | n | N 1 (D) | non-polymer(CO) | COBALT (II) ION | 31K(D) 159A(D) 163E(N) (identity: 0.0 %/37.1 %) | |
| 15 | o | O 1 (D) | non-polymer(CO) | COBALT (II) ION | 113R(H) (identity: 0.0 %/37.1 %) | |
| 16 | p | P 1 (D) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F 35N(P) 125N 126K 128D 129L(U) 155S 156A 157K (identity: 76.5 %/37.1 %) | |
| ALIGNMENTS |
| MODEL[4] Protein A "queryA" TEMPLATE:1g16_D_1 identity=37.1% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
: * ******* * * ** ** * * * *********** * **** ** * * ** * :
1g16_D_1 3:IUKILLIGDSGVGKSCLLVRFVEDKFNPXXXXXXXIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAUGIILVYDITDERTFTNIKQW----F: 98
SecStr : EEEEEES TTSSHHHHHHHHHH ------- EEEEEEEETTEEEEEEEE GGGGGGTTSTTTTTT EEEEEEETT HHHHHTHHHH----H:
ExpBur :ebbbbbbbbeebbbeebbebbeeeeeee-------ebeeeeebebeeeebebebbbbeeeeeeebeeeebbeebebbbbbbbbeeeebbeebeeb----e:
Contact : ppppppmp n p p bb m
Contact : p
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
: *** * * * * * ** * *** ** * * * :
1g16_D_1 99:KTVNEHANDEAQLLLVGNKSDUETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAK: 161
SecStr :HHHHHHS TT EEEEEEE TT TT S HHHHHHHH-HHHT EEE BTTTTBSHHHHHHHHHH:
ExpBur :ebbeeebeeebbbbbbbbeeeeeeeebeeeebeebb-eebebebbbbbbeeeeebeebbeebbe:
Contact : o pp pp c cccc ppp n c nc cc c
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