Protein Model on 1g16 assembly_id=1
(TEMPLATE: 
1g16
assembly_id:1
)Protein Model on 1g16 assembly_id=1
(TEMPLATE: 1g16
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | c(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [159 aa] | RAS-RELATED PROTEIN SEC4 :SEC4_YEAST | ||
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [161 aa] | RAS-RELATED PROTEIN SEC4 :SEC4_YEAST | 8L(I) 45F 60Q (identity: 66.7 %/39.0 %) | |
| 3 | c | A(RAB7A_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [167 aa] | RAS-RELATED PROTEIN SEC4 :SEC4_YEAST | |
| 4 | d | D 1 (D) | polymer(polypeptide(L)) [160 aa] | RAS-RELATED PROTEIN SEC4 :SEC4_YEAST | 41I 42G 44D 67Q 68E 69R 70F 71Q(R) 74G(T) 76A 79R (identity: 81.8 %/39.0 %) | |
| 5 | e | E 1 (A) | non-polymer(CO) | COBALT (II) ION | ||
| 6 | f | F 1 (A) | non-polymer(CO) | COBALT (II) ION | ||
| 7 | g | G 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| 8 | h | H 1 (B) | non-polymer(CO) | COBALT (II) ION | ||
| 9 | i | I 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| 10 | j | J 1 (C) | non-polymer(CO) | COBALT (II) ION | 22T(S) 63D 64T (identity: 66.7 %/39.0 %) | |
| 11 | k | K 1 (C) | non-polymer(CO) | COBALT (II) ION | 31K(D) 159A(D) 163E(N) (identity: 0.0 %/39.0 %) | |
| 12 | l | L 1 (C) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F 34S(N) 35N(P) 125N 126K 128D 129L(U) 155S 156A 157K (identity: 72.2 %/39.0 %) | |
| 13 | m | M 1 (D) | non-polymer(CO) | COBALT (II) ION | ||
| 14 | n | N 1 (D) | non-polymer(CO) | COBALT (II) ION | ||
| 15 | o | O 1 (D) | non-polymer(CO) | COBALT (II) ION | ||
| 16 | p | P 1 (D) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| ALIGNMENTS |
| MODEL[3] Protein A "queryA" TEMPLATE:1g16_C_1 identity=39.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
: * ******* * * ** *** ** * * * *********** * **** ** * * ** * :
1g16_C_1 3:IUKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAUGIILVYDITDERTFTNIKQW----F: 98
SecStr :EEEEEEE STTSSHHHHHHHHHH TT SS EEEEEEESSSSEEEEEEE GGGGGGGGSHHHHTT SEEEEEEETT HHHHHTHHHH----H:
ExpBur :ebbbbbbbbeebbbebbbbbbeeeeeeeeeeeeeeebeeeeebebeeeebebebbbbeeeeeeebeeeebbeebebbbbbbbbeeeebbeebeeb----e:
Contact :b lllllljl k lll dd db b jj ddddd d d d
Contact : l
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
: *** * * * * * ** * *** ** * * * :
1g16_C_1 99:KTVNEHANDEAQLLLVGNKSDUETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAK: 161
SecStr :HHHHHHS TT EEEEEEE TT TT S HHHHHHHH-HHHT EEE BTTTTBSHHHHHHHHHH:
ExpBur :ebbeeebeeebebbbbbbeeeeeeeebeeeebeebb-eebebeebbbbbeeeeebeebbeebbe:
Contact : ll ll lll k k
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