Protein Model on 8pi3 assembly_id=1
(TEMPLATE: 
8pi3
assembly_id:1
)Protein Model on 8pi3 assembly_id=1
(TEMPLATE: 8pi3
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(CATL1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [219 aa] | Cathepsin S :CATS_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [11 aa] | NNPI-C10 inhibitor | 134Q(S) 135C 136G 138C 139W 174G 179N 180G 181G 182L(F) 183M 184D(T) 248A(G) 252G(R) 274M(V) 275D(N) 276H 277G 327A(F) (identity: 57.9 %/57.5 %) | |
| 3 | c | C 1 (A) | non-polymer(CL) | CHLORIDE ION | 250D 252G(R) (identity: 50.0 %/57.5 %) | |
| 4 | d | D 1 (A) | non-polymer(CL) | CHLORIDE ION | 304E(H) (identity: 0.0 %/57.5 %) | |
| 5 | e | E 1 (A) | non-polymer(CL) | CHLORIDE ION | 129V 130K 131N(D) 303G 304E(H) (identity: 60.0 %/57.5 %) | |
| 6 | f | F 1 (A) | non-polymer(GOL) | GLYCEROL | 152F(K) 156G (identity: 50.0 %/57.5 %) | |
| 7 | g | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 269C 271S(T) 272E(Q) 319R(G) 320N 321H 322C (identity: 57.1 %/57.5 %) | |
| 8 | h | H 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 150Q 154K 332T(E) 333V(I) (identity: 50.0 %/57.5 %) | |
| 9 | i | I 1 (A) | non-polymer(CD) | CADMIUM ION | 138C 276H (identity: 100.0 %/57.5 %) | |
| 10 | j | J 1 (A) | non-polymer(CD) | CADMIUM ION | 304E(H) (identity: 0.0 %/57.5 %) | |
| 11 | k | K 1 (A) | non-polymer(CD) | CADMIUM ION | 250D 253H (identity: 100.0 %/57.5 %) | |
| 12 | l | L 1 (A) | non-polymer(CD) | CADMIUM ION | 128P(E) 304E(H) (identity: 0.0 %/57.5 %) | |
| 13 | m | M 1 (A) | non-polymer(CL) | CHLORIDE ION | 132Q 276H 302W (identity: 100.0 %/57.5 %) | |
| 14 | n | N 1 (A) | non-polymer(ACT) | ACETATE ION | ||
| 15 | o | O 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 188Q 191Q(I) 224G(K) 225F(Y) (identity: 25.0 %/57.5 %) | |
| 16 | p | P 1 (A) | non-polymer(ACT) | ACETATE ION | 252G(R) 273D(N) 275D(N) (identity: 0.0 %/57.5 %) | |
| 17 | q | Q 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | 131N(D) 133G (identity: 50.0 %/57.5 %) | |
| 18 | r | R 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 225F(Y) 226V(T) 227D(E) (identity: 0.0 %/57.5 %) | |
| 19 | s | S 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 130K 131N(D) 141F 204Y (identity: 75.0 %/57.5 %) | |
| 20 | t | T 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | 116R(D) 236M(K) 294K(E) 316K(R) 317D(N) (identity: 0.0 %/57.5 %) | |
| 21 | u | U 1 (A) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | 126V 127T 129V 158L 311Y (identity: 100.0 %/57.5 %) | |
| 22 | v | V 1 (B) | non-polymer(CL) | CHLORIDE ION | 275D(N) (identity: 0.0 %/57.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8pi3_A_1 identity=57.5% |
queryA 115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
:* ******** ** ** ** ** ****** **** * *** * *** ******* ** ***** * **** ** * ** **** * * *:
8pi3_A_1 4:PDSVDWREKGCVTEVKDQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY: 103
SecStr : S EEGGGGT B SSB HHHHHHHHHHHHHHHHHHS B HHHHHHHS GGGT TTB HHHHHHHHHHHT EEBTTTS SS :
ExpBur :eeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeeebebebbeeeebbebbebbeeeebbbbeeebebeeeeeeeee:
Contact : t uuleeemqbbb bb s h f h f u b bbbbbb o o s
Contact : usq i
Contact : s
queryA 214:NPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
: ** * * * * *** ** ** ** * ** * * * ** * ********* ********* * ** :
8pi3_A_1 104:DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYG----DLNGKEYWLVKNSWGHNFGEEGYI: 198
SecStr : GGGEEE EEEE TT HHHHHHHHHHT EEEEE SHHHHT SSEE TT - S EEEEEEEEE----EETTEEEEEEE SB TTSTBTTEE:
ExpBur :eeeeebbebeeeeebeeeebebbbebbbeebbbbbbbbbeeeebeebeebebebeeb-eeeeebbbbbbbbb----eeeeeebbbbbbbebeebeeebbb:
Contact : oorr t b c bk g ggpbbbb t med u
Contact : r k c pi e
Contact : p vm j
Contact : l
queryA 313:KMAKDRRNHCGIASAASYPTV: 333
: ** ******* *** :
8pi3_A_1 199:RMARNKGNHCGIASFPSYPEI: 219
SecStr :EEE SSSSGGGTTTS EEEE :
ExpBur :bbbbeeebbbbbbbebbbbbe:
Contact : tt gggg b hh
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