Protein Model on 6yyp assembly_id=1
(TEMPLATE: 
6yyp
assembly_id:1
)Protein Model on 6yyp assembly_id=1
(TEMPLATE: 6yyp
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(CATL1_HUMAN) | A 1 (AAA) | polymer(polypeptide(L)) [220 aa] | Cathepsin S :CATS_HUMAN | |
| 2 | b | B 1 (BBB) | polymer(polypeptide(L)) [222 aa] | Cathepsin S :CATS_HUMAN | 131N(Y) 133G 134Q(S) 253H 254E(P) 255S 257L(F) 258F(L) 260K(R) 266E 268D(S) 302W 305E(N) (identity: 38.5 %/57.0 %) | |
| 3 | c | C 1 (AAA) | non-polymer(ACT) | ACETATE ION | 158L 159I(V) 160S (identity: 66.7 %/57.0 %) | |
| 4 | d | D 1 (AAA) | non-polymer(ACT) | ACETATE ION | 228I(L) 234A(V) 237K(E) 238A 242V(K) 330Y (identity: 33.3 %/57.0 %) | |
| 5 | e | E 1 (AAA) | non-polymer(Q1H) | 1-(furan-2-ylmethyl)-5-(trifluoromethyl)benzimidazol-2-amine | 181G 182L(F) 183M 248A(G) 274M(V) 275D(N) 276H 277G 327A(F) (identity: 44.4 %/57.0 %) | |
| 6 | f | F 1 (BBB) | non-polymer(SIN) | SUCCINIC ACID | ||
| 7 | g | G 1 (BBB) | non-polymer(MLA) | MALONIC ACID | ||
| 8 | h | H 1 (BBB) | non-polymer(MLA) | MALONIC ACID | ||
| 9 | i | I 1 (BBB) | non-polymer(ACT) | ACETATE ION | ||
| 10 | j | J 1 (BBB) | non-polymer(ACT) | ACETATE ION | ||
| 11 | k | K 1 (BBB) | non-polymer(ACT) | ACETATE ION | ||
| 12 | l | L 1 (BBB) | non-polymer(ACT) | ACETATE ION | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6yyp_A_1 identity=57.0% |
queryA 115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
:* ******** ** ** ** ** ***** **** * *** * *** ******* ** ***** * **** ** * ** **** * * *:
6yyp_A_1 4:PDSVDWREKGCVTEVKYQGSCGAUWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY: 103
SecStr : S EEGGGGT B TTSB HHHHHHHHHHHHHHHHHHS B HHHHHHHS GGGT TTB HHHHHHHHHHHT EEBTTTS SS :
ExpBur :eeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeeebebebbeeeebbebbebbeeeebbbbeeebebeeeeeeeeb:
Contact : b bb ccc eee
queryA 214:NPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
: ** * * * * *** ** ** ** * ** * * * ** * ********* ********* * ** :
6yyp_A_1 104:DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYG----DLNGKEYWLVKNSWGHNFGEEGYI: 198
SecStr : GGGEEE SEEEE TT HHHHHHHHHHT EEEEE SHHHHT SSEE TT - S EEEEEEEEE----EETTEEEEEEE SB TTSTBTTEE:
ExpBur :eeeeeebebeeeeebeeeebebbeebbbeebbbbbbbbbebeebeebeeeebebeeb-eeeeebbbbbbbbb----eeeeeebbbbbbbebeebeeebbb:
Contact : d d dd d e bbb bb b b b eeee b b
queryA 313:KMAKDRRNHCGIASAASYPTV: 333
: ** ******* *** :
6yyp_A_1 199:RMARNKGNHCGIASFPSYPEI: 219
SecStr :EEE SSSSGGGTTTS EEEE :
ExpBur :ebbbeeebbbbbbbebbbbeb:
Contact : e d
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