Protein Model on 6yyo assembly_id=1 (TEMPLATE: 6yyo assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(CATL1_HUMAN) A 1 (AAA) polymer(polypeptide(L)) [220 aa] Cathepsin S :CATS_HUMAN
2 b B 1 (BBB) polymer(polypeptide(L)) [220 aa] Cathepsin S :CATS_HUMAN 172P(E) 173Q(K) 174G 176E(K) 185Y(T) 188Q 192D 225F(Y) 227D(E) 229P 272E(Q) 273D(N) 327A(F) (identity: 30.8 %/57.5 %)
3 c C 1 (AAA) non-polymer(SO4) SULFATE ION 132Q 136G 138C 276H 302W (identity: 100.0 %/57.5 %)
4 d D 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 265F(Y) 318R(K) (identity: 0.0 %/57.5 %)
5 e E 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 127T 128P(E) 158L 160S (identity: 75.0 %/57.5 %)
6 f F 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 251A 252G(R) 257L(F) 275D(N) 276H 302W (identity: 50.0 %/57.5 %)
7 g G 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 215P(S) 218S(R) (identity: 0.0 %/57.5 %)
8 h H 1 (AAA) non-polymer(DMS) DIMETHYL SULFOXIDE 189Y 192D 193N (identity: 100.0 %/57.5 %)
9 i I 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 197D 201S 202Y 212K(Q) 214N(D) 217Y (identity: 66.7 %/57.5 %)
10 j J 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 236M(K) 294K(E) 316K(R) 317D(N) (identity: 0.0 %/57.5 %)
11 k K 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 225F(Y) 226V(T) 227D(E) (identity: 0.0 %/57.5 %)
12 l L 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 130K 131N(Y) 204Y (identity: 66.7 %/57.5 %)
13 m M 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 117S 118V 119D 283Y 295Y 297L (identity: 100.0 %/57.5 %)
14 n N 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 152F(K) 157R(K) 158L (identity: 33.3 %/57.5 %)
15 o O 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 131N(Y) 303G 304E(H) (identity: 33.3 %/57.5 %)
16 p P 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 290S(L) 313K(R) (identity: 0.0 %/57.5 %)
17 q Q 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 122E 123K (identity: 100.0 %/57.5 %)
18 r R 1 (AAA) non-polymer(EDO) 1,2-ETHANEDIOL 173Q(K) (identity: 0.0 %/57.5 %)
19 s S 1 (AAA) non-polymer(Q1K) 6-(4-methylsulfonylpiperazin-1-yl)-[1,2,4]triazolo[4,3-b]pyridazine 181G 182L(F) 183M 227D(E) 248A(G) 274M(V) 275D(N) 276H 277G 327A(F) (identity: 40.0 %/57.5 %)
20 t T 1 (BBB) non-polymer(SO4) SULFATE ION
21 u U 1 (BBB) non-polymer(FLC) CITRATE ANION
22 v V 1 (BBB) non-polymer(SO4) SULFATE ION
23 w W 1 (BBB) non-polymer(SO4) SULFATE ION
24 x X 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
25 y Y 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
26 z Z 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
27 1 AA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
28 2 BA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
29 3 CA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
30 4 DA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
31 5 EA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
32 6 FA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
33 7 GA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL 227D(E) 228I(L) (identity: 0.0 %/57.5 %)
34 8 HA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
35 9 IA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
36 A JA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
37 B KA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
38 C LA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
39 D MA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
40 E NA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL 319R(G) (identity: 0.0 %/57.5 %)
41 F OA 1 (BBB) non-polymer(EDO) 1,2-ETHANEDIOL
42 G PA 1 (BBB) non-polymer(Q1K) 6-(4-methylsulfonylpiperazin-1-yl)-[1,2,4]triazolo[4,3-b]pyridazine 182L(F) 227D(E) (identity: 0.0 %/57.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6yyo_A_1 identity=57.5%
queryA       115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :* ******** ** ** ** ** ****** **** *   *** * *** *******    ** ***** *  ****  ** * **  **** *    * *:
6yyo_A_1       4:PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY: 103
SecStr          : S EEGGGGT      B TTS  HHHHHHHHHHHHHHHHHHS    B HHHHHHHS GGGT  GGG   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbbeeeeebebbeeeebbebbebbeeeebbbbeeebebeeeeeeeeb:    
Contact         :  mmm  qq   ee llc   c c             n    ne e           bbbb b    sss b  bh  bh   i   ii l       i 
Contact         :                o                          n              rh        G         h                     

queryA       214:NPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
                :  **  *        *   *  *  ***  ** **  ** * **  *  * * ** *      *********          *********   *  ** :
6yyo_A_1     104:DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYG----DLNGKEYWLVKNSWGHNFGEEGYI: 198
SecStr          : GGGEEE   EEEE  TT HHHHHHHHHHT  EEEEE   SHHHHT  SSEE  TT - S   EEEEEEEEE----EETTEEEEEEE SB TTSTBTTEE:    
ExpBur          :eeeeeebebeeeeebeeeebebbeebbbeebbbbbbbbbebeebeebeebbbebeeb-eeeeebbbbbbbbb----eeeeeebbbbbbbebeebbeebbb:    
Contact         :ig ig      bkb7bb      j           s  ff    f       d      bbsfcs     m      p   jm m    coo        
Contact         :           k k                                                sf                         f          
Contact         :             s                                                 s                                    
Contact         :             7                                                                                      
Contact         :             G                                                                                      

queryA       313:KMAKDRRNHCGIASAASYPTV: 333
                : **    *******  ***  :
6yyo_A_1     199:RMARNKGNHCGIASFPSYPEI: 219
SecStr          :EEE SSSSGGGTTTS EEEE :    
ExpBur          :bbbbeeebbbbbbbebbbbeb:    
Contact         :p  jjdE       b                                                                                     
Contact         :              s

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