Protein Model on 6ql8 assembly_id=1
(TEMPLATE: 
6ql8
assembly_id:1
)Protein Model on 6ql8 assembly_id=1
(TEMPLATE: 6ql8
assembly_id:1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(CATL1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [217 aa] | Cathepsin K :CATK_HUMAN | |
| 2 | b | B 1 (A) | non-polymer(J5N) | ~{N}-[(2~{S})-1-[(3~{R},3~{a}~{R},6~{R},6~{a}~{R})-6-ethynyl-3-oxidanyl-2,3,3~{a},5,6,6~{a}-hexahydrofuro[3,2-b]pyrrol-4-yl]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-[5-fluoranyl-2-(4-methylpiperazin-1-yl)-1,3-thiazol-4-yl]benzamide | 132Q 136G 137S 138C 139W 171G(S) 172P(E) 175N 176E(D) 179N(G) 180G 181G 182L(Y) 183M 185Y(N) 248A 274M(L) 275D(N) 276H (identity: 57.9 %/60.0 %) | |
| 3 | c | C 1 (A) | non-polymer(NO3) | NITRATE ION | 113E(R) 236M(K) 294K 316K(R) 317D(N) (identity: 20.0 %/60.0 %) | |
| 4 | d | D 1 (A) | non-polymer(NO3) | NITRATE ION | 274M(L) 275D(N) (identity: 0.0 %/60.0 %) | |
| 5 | e | E 1 (A) | non-polymer(NO3) | NITRATE ION | 113E(R) 114A 233K 236M(K) 237K(R) (identity: 40.0 %/60.0 %) | |
| 6 | f | F 1 (A) | non-polymer(NO3) | NITRATE ION | 169C 170S(V) 171G(S) 172P(E) 189Y 192D(K) (identity: 33.3 %/60.0 %) | |
| 7 | g | G 1 (A) | non-polymer(NO3) | NITRATE ION | 132Q 133G 135C 136G 276H 302W (identity: 100.0 %/60.0 %) | |
| 8 | h | H 1 (A) | non-polymer(NO3) | NITRATE ION | 121R 308M(N) 311Y 312V(I) 313K(L) (identity: 40.0 %/60.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6ql8_A_1 identity=60.0% |
queryA 113:EAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK: 212
: ** *** * ******************** ****** *** * ** ****** * ** ** * ****** * * *** *** **** :
6ql8_A_1 2:RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCM: 99
SecStr : S EETTTTT B TTSS HHHHHHHHHHHHHHHHHHS B HHHHHHH SS--S GGG HHHHHHHHHHHT EEBTTTS SS :
ExpBur :ebeeebbbeeeebbbebeebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbee--bebeeeeebbbbbebbeeeebbbbeeebeeeeeeeeee:
Contact :ce h bg gbbbb ffbb bb bbbbb b f f
Contact :e g g ff
queryA 213:YNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGY: 311
:*** * * ** **** *** *** ****** ** ** * * * * * ** **** ** * ****** ** **:
6ql8_A_1 100:YNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK----GNKHWIIKNSWGENWGNKGY: 195
SecStr : GGGEEE EEEE TT HHHHHHHHHHH EEEEE SHHHHT SSEE TT TT EEEEEEEEEEET----TEEEEEEE SB TTSTBTTE:
ExpBur :beeeeeebebebeeebeeeebeebbebbeebbbbbbbbbbeeeebeebeeebbeeeebeeeeeebbbbbbbbbeee----eeebbbbbbbebeebeeebb:
Contact : e ce b bbb c g h h
Contact : e ddg
queryA 312:VKMAKDRRNHCGIASAASYPTV: 333
: ** * **** ** * :
6ql8_A_1 196:ILMARNKNNACGIANLASFPKM: 217
SecStr :EEEESSSSSGGGTTSS EEEE :
ExpBur :bbbbbeeebbbbbbbebbbbeb:
Contact :hh cc
|
[help]