Protein Model on 5t6u assembly_id=1
(TEMPLATE: 
5t6u
assembly_id:1
)Protein Model on 5t6u assembly_id=1
(TEMPLATE: 5t6u
assembly_id:1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(CATL1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [215 aa] | Cathepsin K :CATK_MOUSE | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [215 aa] | Cathepsin K :CATK_MOUSE | 151M(L) 152F(K) 153R(K) 154K 155T 156G 157R(K) 218S(K) 219V(A) 220A 221N(K) 223T(R) (identity: 33.3 %/58.3 %) | |
| 3 | c | B 1 (A) | non-polymer(SO4) | SULFATE ION | 125Y 152F(K) (identity: 50.0 %/58.3 %) | |
| 4 | d | B 2 (A) | non-polymer(SO4) | SULFATE ION | 194G 218S(K) 221N(K) (identity: 33.3 %/58.3 %) | |
| 5 | e | C 1 (A) | non-polymer(SO4) | SULFATE ION | 233K 236M(K) 294K 316K(R) 317D(N) (identity: 40.0 %/58.3 %) | |
| 6 | f | C 2 (A) | non-polymer(SO4) | SULFATE ION | ||
| 7 | g | D 1 (A) | non-polymer(SO4) | SULFATE ION | 131N 302W 303G 304E 305E(S) (identity: 80.0 %/58.3 %) | |
| 8 | h | D 2 (A) | non-polymer(SO4) | SULFATE ION | ||
| 9 | i | E 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 214N 217Y(A) (identity: 50.0 %/58.3 %) | |
| 10 | j | E 2 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5t6u_A_1 identity=58.3% |
queryA 115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN: 214
:* * * * ******************** ****** *** * ** ****** * ** ** * ****** *** *** *** *** **:
5t6u_A_1 2:PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE--NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYN: 99
SecStr : S EETTTTT B SS HHHHHHHHHHHHHHHHHHS B HHHHHHH TT--S GGG HHHHHHHHHHHT EEBTTTS SS :
ExpBur :eeeebbeeeebbbebeebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbee--bebbeeeebbbbbebbeeeebbbbbeebebebeeeeeebe:
Contact : c g bbbbbbb d i
Contact : c
queryA 215:PKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
: * * ** **** *** ****** *** ** ** * * * * ******* * * ****** ** ** :
5t6u_A_1 100:ATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQK----GSKHWIIKNSWGESWGNKGYAL: 195
SecStr :GGGEEE EEE TT HHHHHHHHHHT SEEEEE SHHHHT SSEE TTS SSS EEEEEEEEEEET----TEEEEEEE SB TTSTBTTEEE:
ExpBur :eeeeebebebeeebeeeebebbbebbeebbbbbbbbbbeeeebeebeeeebeeeebeeeeeebbbbbbbbbeee----eeebbbbbbbebeebbeebbbb:
Contact : ibbbb b e e e gggg
Contact : d d
queryA 314:MAKDRRNHCGIASAASYP: 331
: * * *** ** *:
5t6u_A_1 196:LARNKNNACGITNMASFP: 213
SecStr :EE SSSSGGGTTTT EEE:
ExpBur :bbbeeebbbbbbbebbbb:
Contact : ee
|
[help]