Protein Model on 4n79 assembly_id=1
(TEMPLATE: 
4n79
assembly_id:1
)Protein Model on 4n79 assembly_id=1
(TEMPLATE: 4n79
assembly_id:1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(CATL1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [215 aa] | Cathepsin K :CATK_HUMAN | |
| 2 | b | B 1 (B) | branched(oligosaccharide) | alpha-L-idopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-alpha-L-idopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-alpha-L-idopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose | 114A 233K 237K(R) 241T(R) (identity: 50.0 %/60.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4n79_A_1 identity=60.3% |
queryA 114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
:** *** * ******************** ****** *** * ** ****** * ** ** * ****** * * *** *** **** *:
4n79_A_1 1:APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMY: 98
SecStr : S EETTTTT B TTSS HHHHHHHHHHHHHHHHHHS B HHHHHHH TT--S GGG HHHHHHHHHHHT EEBTTTS SS :
ExpBur :eeeebbbeeeeebbebeebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbee--bebbeeeebbebbebbeeeebbbbeeebeeeeeeeeeeb:
Contact :b
queryA 214:NPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
:** * * ** **** *** *** ****** ** ** * * * * * ** **** ** * ****** ** ** :
4n79_A_1 99:NPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK----GNKHWIIKNSWGENWGNKGYI: 194
SecStr : GGGEEE EEEE TT HHHHHHHHHHT EEEEE SHHHHT SSEE TT TT EEEEEEEEEEET----TEEEEEEE SB TTSTBTTEE:
ExpBur :eeebeebebebeeebeeeebebbbebbbebbbbbbbbbbeeeebeebeeebbebeebeeeeeebbbbbbbbbeee----eeebbbbbbbebeebeeebbb:
Contact : b b b
queryA 313:KMAKDRRNHCGIASAASYPTV: 333
: ** * **** ** * :
4n79_A_1 195:LMARNKNNACGIANLASFPKM: 215
SecStr :EEE SSSSGGGTTTS EEEE :
ExpBur :bbbbeeebbbbbbbebbbbee:
|
[help]