Protein Model on 1mhw assembly_id=1
(TEMPLATE: 
1mhw
assembly_id:1
)Protein Model on 1mhw assembly_id=1
(TEMPLATE: 1mhw
assembly_id:1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(CATL1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [174 aa] | Cathepsin L :CATL_HUMAN | |
| 2 | b | B 1 (C) | polymer(polypeptide(L)) [41 aa] | Cathepsin L :CATL_HUMAN | 119D 121R 126V 127T 128P 129V 130K 131N 132Q 141F 146A 147L 150Q 154K 184D 187F 221N 222D 223T 224G 225F 226V 227D 228I 230K 231Q 232E 235L 236M 242V 245I 246S 247V 248A 249I 250D 256F 257L 259Y 260K 261E 262G 263I 264Y 265F 266E 269C 270S 271S 274M 276H 278V 279L 280V 281V 282G 283Y 284G 285F 286E (identity: 100.0 %/99.4 %) | |
| 3 | c | F 1 (F) | polymer(polypeptide(L)) [3 aa] | 4-biphenylacetyl-Cys-(D)Arg-Tyr-N-(2-phenylethyl) amide | 131N 252G 257L 275D (identity: 100.0 %/99.4 %) | |
| 4 | d | G 1 (G) | polymer(polypeptide(L)) [5 aa] | 4-biphenylacetyl-Cys-(D)Arg-Tyr-N-(2-phenylethyl) amide | 132Q 133G 134Q 135C 136G 138C(U) 139W 174G 176E 179N 180G 181G 182L 183M 248A 274M 275D 276H 277G (identity: 94.7 %/99.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1mhw_A_1 identity=99.4% |
queryA 114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
:************************ ***************************************************************************:
1mhw_A_1 1:APRSVDWREKGYVTPVKNQGQCGSUWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr : S EEGGGGT SSS HHHHHHHHHHHHHHHHHHS B HHHHHHH TTTT GGG HHHHHHHHHHHT EEBTTTS SS :
ExpBur :eeeebebeeeebebeeeeeeebebbbbbbbbbbbbbebeeeeeeeeebbbbbbbbbbeebebebeeeeebeebbebbeeeebbbbbeebeeeeeeeeeeb:
Contact : b b bbbbbbbdddd dd b bb b b d d dddddb b
Contact : cd
queryA 214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFES: 287
:**************************************************************************:
1mhw_A_1 101:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFES: 174
SecStr : GGGEEE S SSHHHHHHHHHHT SEEEEE SHHHHT SS TT SS EEEEE EE :
ExpBur :eeeeeebebeeeeeeeeeeeeeeebbbeebbbebeebbeeeeeeeeeeeeeebeeeeeeeeebbeeeeeeeeee:
Contact : bbbbbbbb bbb bb b bbbbbb c bb bbbbbbbb bbb bcbdbbbbbbbbb
Contact : d c ddd
|
[help]