[pdbjlvh2]Protein Model on 6uub_C_1_M

Protein Model on 6uub_C_1_M_1 (TEMPLATE: 6uub )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]
MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query F)
1	a	F	C 1 (CCC)	polymer(polypeptide(L)) [1340 aa]	DNA-directed RNA polymerase subunit beta :RPOB_ECO57
2	b		M 1 (DDD)	non-polymer(UTP)	URIDINE 5'-TRIPHOSPHATE	1105S 1106R
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:6uub_C_1
6uub_C_1       1:XXYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKL: 100
SecStr          :--  HHHHT   EE   S  SS    SS HHHHHHHHHS   SSS  THHHHHHHH SEE SSSSEEEEEEEEEE   SS HHHHHHHTS  EEEEEEEE:    
ExpBur          :--ebebebbbbbbbbbeeeeebeeeebbeebeebbeebeeeeeeeeebbbbbbeebbebebeeebbbbbbeebeeeeeeeeeeebeeeeebbbbebebeb:    

6uub_C_1     101:RLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDR: 200
SecStr          :EEEE  SSSS   SS  EEEEEEEEEEE B SSS EESSS EEEE EEEEE SEEEEEEETTSSTTTT  EEEEEEE SBS  EEEE  TT   EEEETT:    
ExpBur          :ebbbbeeeeeeeeeeeebeeebebbebbbbbeebbbbbebebbbbbbbbbebbbbbbebeebeeeeeeeebebbbbbbeeebebbbbbbeebbbbbbbee:    

6uub_C_1     201:RRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKD: 300
SecStr          : S EETTHHHHTTS  HHHHHHHHS  EEEEEETTEEEEE  SSSS SSEESS EE SS EEE TTEE  HHHHHHHHHTT  EEE  TTTTTT BB S :    
ExpBur          :eeebbbbbbbbbbeeeeeebbeeebebbbbbbeeeebbbebebebbeeeebebebebeeeebbeeeeebeeebbeebeeeebeebebeeebbeeebbbee:    

6uub_C_1     301:YIDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAV: 400
SecStr          :EE TTT SEEE SS B  HHHHHHHHTTT  EEEE    SSSS   HHHHHHH    SHHHHHHHHHHHHSTTS   HHHHHHHHHHHHS TTT B HHH:    
ExpBur          :bebeeeeeebbebbeebeeeebeebeebebeebbbbbebeeeebebbbebbeebebeeeeebbeebbebbeeeeeeeeebbeebbeebbbbeeebebeeb:    

6uub_C_1     401:GRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISA: 500
SecStr          :HHHHHHHHTT S SS  SS  HHHHHHHHHHHHHHHHSSS    TTSTTTEEEE HHHHHHHHHHHHHHHHHHHHHHHHHHS TTT  HHHH  SHHHHH:    
ExpBur          :bbbbbbebbebeeeeeeebbeeebbbebbebbbebbbeeeeeeeebebbbbbbbbbbebbbeebbebbeebbeebeeebeeeebeeeebeebbebeebee:    

6uub_C_1     501:AVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT: 600
SecStr          :HHHHHHHHSSSEEE   SSHHHHHHHHTEEES STTS  TTT  STTTS  GGGTTTB TT S SSSSTTT EEBBSS EE SSSSEEE EEEEETTEEE:    
ExpBur          :bbeebbeebebbeebebbbbbbbbbbbbbbbbbbeeeeeeeebeeeebeebebbebbbbebbbeeeeeebbbbbbbbbbeebeebbbbbbbbebeeeebe:    

6uub_C_1     601:DEIHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLV: 700
SecStr          :EEE  EETTTTTTS EE TTS B SSSSBSSSSEEEEETTEEEEE TTT  EEESSSSSSSBHHHHT TTGGGB HHHHHHHHHHHTTB   SS    SE:    
ExpBur          :eeeeebbbeebeeebbbebebeeeeebebeeeebebbbeeeeeebeeeebebbbbbbbbebbbbbbbbbbbeebeeebbbbbbbbbbebbbbeeeebbbb:    

6uub_C_1     701:GTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNM: 800
SecStr          :E SHHHHHHHHTT SEE SS EEEEEE SSEEEEEE TTTS SSS  EEEEE   SB  TTS  B  EE S TT EE TT EEEE TTEETTEE  SEEE:    
ExpBur          :bbebbebbbebbebbbebebbbebeeeeeebbbbebeeeebeeeebbbbebebeeeeebeeebbbbbeebbeeebebeeebbbbbbbbbebbbbbbbbbb:    

6uub_C_1     801:RVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK: 900
SecStr          :EEEE   TTTTSSS EEEEHHHHHTTTT  EE  EEEEEE B SS B B  S  SS  TTGGGSB SSSBB TT EEETTSEEE  EE   S    HHHH:    
ExpBur          :bbbbbebeeebeebebbbbeebbeeebbbbbbbeebebbbeeeeebebebeeebbeeeeeeeeebbebbbbeeebebeeeebbbbbbbbeeeeeeeeeee:    

6uub_C_1     901:LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLEL:1000
SecStr          :HHTTTS     S EE  EE  TT EEE  EEEEEE SSS   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS  STTTTSS GGGSTT :    
ExpBur          :eeeeeeeeeeeeeeeebbebeeebebebeebbbbeeeeeeebebbeebeeeeeeebeeebeeeeeeeeebbbebbeebbeeeeeeeeebeeeeeeebeee:    

6uub_C_1    1001:GLTDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNP:1100
SecStr          :  SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS     TT  EEEEEE  EE    TT BEE SSS   BEEEEE TTTS EETT  B SEEE T:    
ExpBur          :eeeeeeeeeebeebbeeeeebeeeeeeebeeeeeebeeebeeeeebbbbbebbbbbebebeeebebbbbbbbebebeeebeeeebbebeeeeebbbbbbe:    

6uub_C_1    1101:LGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQRAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLK:1200
SecStr          :TTTTTTTBTHHHHHHHHHHHHHHHHHHHHHHHHHT  HHHHHHHHHHHHS STT S    SSSS HHHHHHHHHHHSS   EE  SSS   HHHHHHHHH:    
ExpBur          :ebbeeeebebbbbbbbbbbbbbbbbeebbebbeeeeeeeebeebbeebbeebeebebebebeebeeebbeebbeebeebbbbbbbbebbbeeebbeebbe:    
Contact         :    bb                                                                                              

6uub_C_1    1201:LGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNG:1300
SecStr          :HTT  SS EE EE TTT SB SS EEEEEEEEEEBS  GGGT    SS    SSS S   TTTTT      HHHHHHHHHHT HHHHHHHHTTTTS HHH:    
ExpBur          :bbeeeeebebebebeeeeeeeeeebbbbbbbbbbbeebeeeeeeeeeeeeebeeeeeeeeeeeeebeeeebeeebeebeeeeeeeebeeeebbebbbeeb:    

6uub_C_1    1301:RTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE----------------------------------------------------------:1342
SecStr          :HHHHHHHHHHT         HHHHHHHHHHHTTT       -:    
ExpBur          :beebeebeeeeeeeeeeeeeeeeeeebeeeeeeeeeeeeee-:
Protein Model on 6uub_C_1_M_1 (TEMPLATE: 6uub )

Input Residue Numbers for Focused Sites
