[pdbjlvh2]Protein Model on 6uu3_D_1_N

Protein Model on 6uu3_D_1_N_1 (TEMPLATE: 6uu3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query F)
1	a	F	D 1 (DDD)	polymer(polypeptide(L)) [1362 aa]	DNA-directed RNA polymerase subunit beta' :RPOC_ECOLI
2	b		N 1 (DDD)	non-polymer(CTP)	CYTIDINE-5'-TRIPHOSPHATE	425R 427P 458N 460D 462D 929Q 932M 933R 936H

FOCUSED TEMPLATE

MODEL[1] TEMPLATE:6uu3_D_1

6uu3_D_1       1:XXXXXXXXXXXXXXEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRE: 100
SecStr          :--------------   S EE     HHHHHHHEEEE      B SSS SB TTSTT HHHH  SBTTB SSS S TTTS S   TTT    S GGGGGT:    
ExpBur          :--------------eeeebeeeebebbeebeeebeeebeeeeebeeeeeebeeebbbbbebbbbeeebebeeeebeeeeeeeeebeebebebbebebbee:    

6uu3_D_1     101:RMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQ: 200
SecStr          : EEEEEEEEEEE HHHHTSTT SHHHHHT  HHHHHHHHTTSSEEEEEESSTTS SS EE HHHHHHHHHHT SSEEEE SHHHHHHHHHH  HHHHHHH:    
ExpBur          :bebbbebebbbbbbbbbebeebbbbebbebeeeebeebbebebbbbbebeeeebeeeeebeeeeeeebeeeebeebebebbbebbbbbbeebebeebbee:    

6uu3_D_1     201:LREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ: 300
SecStr          :HHHHHHH   HHHHHHHHHHHHHHHHHHHHT  GGGGEEEEEEE  GGGS EEE TTS EEE HHHHHHHHHHHHHHHHHHHHHTT  HHHHHHHHHHHH:    
ExpBur          :beeebeeeeeeeebeebbebbebbeebeeeebebbbbbbebbebbbbeebeeeeeeeeeeeeeebbebbeebbebbbebeeeeeeeeeeeebbebbeebb:    

6uu3_D_1     301:EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKM: 400
SecStr          :HHHHHHHSTTTTSS  B SSS B   HHHHHSSTTSSHHHHTSS   SSEEEEEEEE TTS TTEEEEEHHHHHHHTHHHHHHHHHHTTS SSHHHHHHH:    
ExpBur          :ebbbbbbbbebeeeebeeeeeeebebebebeeeeebebeeeeeeeeeeeeeebebeebeebebbbbbbbeebbbebbeeebbeebeeeeebeeeeebeeb:    

6uu3_D_1     401:VEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPII: 500
SecStr          :HHTT HHHHHHHHHHHTT  EEEE SS  SGGGEEEEEEEEESSSSEEE GGGHHHHT  TTT EEEEE   SHHHHHHHHHTSBTTT  B SSSSSBS :    
ExpBur          :beeeeeebeebbeebbeebbbbbebeeebbebbebbbebeebeeeebebbebbbebbbbeeeebebbbebbeeeebeeebeeeebbbebbbbbbeeebeb:    
Contact         :                        b b                              b b b                                      

6uu3_D_1     501:VPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAKTSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKA: 600
SecStr          :   THHHHHHHHHH   SS TTTTEE SSHHHHHHHHHHTSS SS EEEEEEEEEEE SSS EEEEEEEEEEEHHHHHHHTTS TTS THHHHS   HHH:    
ExpBur          :bbeeebbbbbbebbbebbeeeeeeeebebbeebeebbeeeebebbbebebebebeeeeeeeeeeeeeeeeebbbbbbbbbeebeebbebebbeeebbeeb:    

6uu3_D_1     601:ISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDN: 700
SecStr          :HHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHHH     TTTS   TTHHHHHHHHHHHHHHHHHHHHHSS  HHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebeeeeeeeebbebbbebbebbeebbeebeeeeeeebbeebeebeebbeebeeebeebeeeeeeeeeeeeebbbebbebbbebbeebbebbbeb:    

6uu3_D_1     701:LQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRL: 800
SecStr          :HHS EEEEETTEEEEE    HHHHHHHHTSS  HHHHHHHTS  B  B TTS B SS B   TTT   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bebebeeeeeeeeeebebebbbbbebebebeeeeeebbbebbbbbbbbeeeeebbeebbebbeeeebeeebeeebeebeeebeebeeeeeeebeebbebb:    

6uu3_D_1     801:VDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYG: 900
SecStr          :HHHTSS  EEES       EEE  B  SSS SB HHHHTTT BB S    SSSSS  S SS B  HHHHHHHHHHT   EEE  SSS   TTSEEHHHH :    
ExpBur          :ebbbbebbbeeeeeebeebbebebbbeebeeeeebeebbebbbbbeeeeeeeeeeeebeeeeebeeeebeebeeeebeebbbbbbbbbebbebbbbebbb:    

6uu3_D_1     901:RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYG:1000
SecStr          :EETTTTEE  TT  HHHHHHHHHHHHHHHHHHHHHHH  S         EE SS EEEEEES  EEE TTS EEE  SSEEEEEE SS  EEEEEEE TT:    
ExpBur          :bbbbebeebeebbebbebbbbbbbbbbbbbbeeebeeeeebeeebeeeebebeeebebebeeeeeeebeeeeebbbbeebebebbeeeeeeebbbebebb:    
Contact         :                            b  bb  b                                                                

6uu3_D_1    1001:AVLAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYF:1100
SecStr          : EESS TT EE TT EEEE  SS EEEE SS BEEEEES  BTTTEEEE  STT   EEEE  TTT  TTTTT   EEEEE TTS B B TTSS B EEE:    
ExpBur          :bebeebeeeebeeeeebbebeeebebbbbebebebeebebeeeebbeeeeeeeeeebebbbbeeeebeeebeeeebbbbbbeeeeeeeebeeeeeebebe:    

6uu3_D_1    1101:LPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE:1200
SecStr          :  TT BB S SS  B TT EEEEE       SSHHHHHHHHHHHHTT   SS   B SS EEEEEEEEETTEEEEEEE SS  S EE  B SSS  S  S:    
ExpBur          :beeebbbeeeeeeebebbeebbebeeeeeeeebbeebbeebbebbbbeeeeeebbbbbeebebeeeeeeebebebebebeeeeeeeeeebebebebebee:    

6uu3_D_1    1201:GERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGA:1300
SecStr          :S EE TT B SSS   HHHHHHHT HHHHHHHHHHHHHHHHHHTT    HHHHHHHHHHHT EEEE S  SSS  TT EEEHHHHHHHHHHHHHH SS  :    
ExpBur          :eeebeebeebbeeeebbebbbebeebeebbebbbeebbebbbeeebebbbbbbbbbbbbbbbbbebeeebeeebeeebebbebebbebbeebeeeeeeeb:    

6uu3_D_1    1301:TYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAG------------------------:1376
SecStr          : EEE    THHHHHHSS HHHHHHHS HHHHHHHHHHHT EE   SHHHHHHTT   SSTHHHHHHHHHHHHTT -:    
ExpBur          :eeeeebbbbbebbeebebbbbbbbbeebbebbbebbbeeeebebebbbbbebeeeeebbeebbeebeeeeeeeee-:

Protein Model on 6uu3_D_1_N_1 (TEMPLATE: 6uu3 )

Input Residue Numbers for Focused Sites