Protein Model on 6p71_C_1_N_1 (TEMPLATE: 6p71 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FC 1 (C) polymer(polypeptide(L)) [1111 aa] DNA-directed RNA polymerase subunit beta :RPOB_THET8
2 b N 1 (D) non-polymer(UTP) URIDINE 5'-TRIPHOSPHATE 878S 879R
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:6p71_C_1
6p71_C_1       1:MEIKRFGRIREVIPLPPLTEIQVESYRRALQADVPPEKRENVGIQAAFRETFPIEEXXXXXXXLVLDFLEYRLGEPPFPQDECREKDLTYQAPLYARLQL: 100
SecStr          : EEEE      SS    TTHHHHHHHHHHH TTS GGG  SSHHHHHHHHH SB  ------- EEEEEEEEE   SS HHHHHHHT   EEEEEEEEEE:    
ExpBur          :eeeeebeeeeebbebbebbbbbeebbeebbbeeeeeeebeeebbbbbbebbbebee-------bbbebeebebbeeeeeeeebbeeeebbebbbebebeb:    

6p71_C_1     101:IHKDTGLIKEDEVFLGHIPLMTEDGSFIINGADRVIVSQIHRSPGVYFTPDPARPGRYIASIIPLPKRGPWIDLEVEPNGVVSMKVNKRKFPLVLLLRVL: 200
SecStr          :E TTT  EEEEEEEEEEEE   TTS EEETTEEEEE EEEEE SEEEEEE SSSTT EEEEEE STTSS  EEEEE TTS EEEEETTEEEEHHHHHHHT:    
ExpBur          :ebeeeeeeeeeebebbebbbbbebbbbbbebebebbbbbbbebbbbbbeebeeeeeeebbbbbbbeeeebebebbbeeeeebbbebeeeebebbbbbbbb:    

6p71_C_1     201:GYDQETLARELGAYGELVQGLMDESVFAMRPEEALIRLFTLLRPGDPPKRDKAVAYVYGLIADPRRYDLGEAGRYKAEEKLGIRLSGRTLARFEDGEFKD: 300
SecStr          :T  HHHHHHHHTTSHHHHHHH  HHHHTS HHHHHHHHHHHHSTTS   HHHHHHHHHHHHT TTT    HHHHHHHHHHHT   SSSSSEEEETTEEEE:    
ExpBur          :ebeeeebeeebeebeebbebbeeeebbebeeeebbeebbeebeeeeeeeeeebbebbebbbbbeeebbbbebbeebbbeebeeebeeebbbeeeeeebeb:    

6p71_C_1     301:EVFLPTLRYLFALTAGVPGHEVDDIDHLGNRRIRTVGELMTDQFRVGLARLARGVRERMLMGSEDSLTPAKLVNSRPLEAAIREFFSRSQLSQFKDETNP: 400
SecStr          :SSHHHHHHHHHHHHTT TT     TTSTTSEEEE HHHHHHHHHHHHHHHHHHHHHHHTTSS SSS  HHHH   HHHHHHHHHHHHH SSEEE   SSH:    
ExpBur          :bbbbbbbebbbbbeeeeeebeebeebbbbbbbbbbbbebbbbebbebbeebbebbeeebeeeeeeebebeebbebeebbebbeebbbebebbeebbbbbb:    

6p71_C_1     401:LSSLRHKRRISALGPGGLTRERAGFDVRDVHRTHYGRICPVETPEGANIGLITSLAAYARVDELGFIRTPYRRVVGGVVTDEVVYMTATEEDRYTIAQAN: 500
SecStr          :HHHHHHHTEEES STTS  GGG  HHHHS  GGGTTTB SS   SSTTTTTEEEB TT EE TTS EEEEEEEEETTEEEEEEEEE HHHHTTS EE TT:    
ExpBur          :bbbbbbbbbbbbbbeeeeeeeebeeebeeebebbebbbbebbbeeeeeebbbbbbbbbbeeeeebbbebbbbebeebebeeeebebbbeebbebbbbebe:    

6p71_C_1     501:TPLEGNRIAAERVVARRKGEPVIVSPEEVEFMDVSPKQVFSVNTNLIPFLEHDDANRALMGSNMQTQAVPLIRAQAPVVMTGLEERVVRDSLAALYAEED: 600
SecStr          :S EETTEE  SSEEEEETTEEEEE GGG  EEES GGGGS TTGGG TTGGGB HHHHHHHHHHHTTB   TT B  SEE S HHHHHHHHT SEE SSS:    
ExpBur          :beeeeeebeeeebebbeeeeeeebebeebebbbbbbbbbbbbbbbbbbbbeebeeebbbbbbbbbbebbbbeebbbbbbbbebbeebbebbebbbbbeee:    

6p71_C_1     601:GEVAKVDGNRIVVRYEDGRLVEYPLRRFYRSNQGTALDQRPRVVVGQRVRKGDLLADGPASENGFLALGQNVLVAIMPFDGYNFEDAIVISEELLKRDFY: 700
SecStr          :EEEEEE SSEEEEEETTS EEEEE   SEE TTSBEE  EE   TT EE TT EEEE TTEETTEE SEEEEEEEES  TTTTGGG EEEEHHHHHTTTT:    
ExpBur          :bebeeeeeebbbbebeeeeebebebeeeebbbbbbbbbbbeebeeeeebeeeeebbbbbbbeebbbbbbbbbbbbbbebeeebeeebbbbbeebbeeebb:    

6p71_C_1     701:TSIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEGVVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEKARDVKDTSLRVPPGEGGIV: 800
SecStr          : EEEEEEEEEEEE  TT   B  S  TT  HHHHTTB TTSBB TT EE TT EEE  EEE  SS S HHHHHHHHHHT    SEEE  EE  TT  EEE:    
ExpBur          :bbebbeebebebeeeeeebbebeeebbeeeeeebeebeeebbbeeebebeeeebbbbbbbeeeeeebeeeeeeeeeeeeeeeeebeebbbebeeeebbeb:    

6p71_C_1     801:VRTVRLRRGDPGVELKPGVREVVRVYVAQKRKLQVGDKLANRHGNKGVVAKILPVEDMPHLPDGTPVDVILNPLGVPSRMNLGQILETHLGLAGYFLGQR: 900
SecStr          :EEEEEE SSSTT   STTEEEEEEEEEEEEE   TT EEEETTS EEEEEEEE GGGS B TTS B SEEE GGGHHHHTBTHHHHHHHHHHHHHHHTEE:    
ExpBur          :eeebebeeebeebeeeeebebbbbbbbbbebebeeebebbbbbbbebebeeebeeeebbebeeeeebbbbbbeebbeebebebbbbbbbbbbbbeeeebb:    
Contact         :                                                                             bb                     

6p71_C_1     901:YISPIFDGAKEPEIKELLAQAFEVYFGKRKGEGFGVDKREVEVLRRAEKLGLVTPGKTPEEQLKELFLQGKVVLYDGRTGEPIEGPIVVGQMFIMKLYHM:1000
SecStr          :EE  SSS   HHHHHHHHHHHHHHHHHHHHHTT    HHHHHHHHHHHHTTSS TTS HHHHHHHHHTTTEE  B TTT  B SS EEEEEEEEEEBS  :    
ExpBur          :bbbbbebbbeeeebeebbbebbeebbeebeeeeeeeeeebeebbeebeeeebbeeeeeeeebbeebbeebebbbbbeeeeebeeebbbbbbbbbbbbeeb:    

6p71_C_1    1001:VEDKMHARSTGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEMLTLKSDDIEGRNAAYEAIIKGEDVPEPSVPESFRVLVKELQALALDVQ:1100
SecStr          :HHHH    SS  B TTT  B BSGGGT B    HHHHHHHHHHT HHHHHHHHTTTTT HHHHHHHHHHHHHT         HHHHHHHHHHHTTT    :    
ExpBur          :eeeeeeebeeeeeeeeeeeeeeeeeeebeeeebeeebeebeeeeeeeebeeeebbebbbeebbeebeebeeeeeeeeeeeeeeeebbebeeeeeeeeeee:    

6p71_C_1    1101:TLDEKDNPVDIFEGLASK----------------------------------------------------------------------------------:1118
SecStr          :EE TTS EE TTTTTT -:    
ExpBur          :eeeeeeeeeebbeeeee-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123