[pdbjlvh2]Protein Model on 5d4c_K_1_HA

Protein Model on 5d4c_K_1_HA_1 (TEMPLATE: 5d4c )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query F)
1	a	F	K 1 (M)	polymer(polypeptide(L)) [1080 aa]	DNA-directed RNA polymerase subunit beta :RPOB_THET8
2	b		HA 1 (N)	non-polymer(CTP)	CYTIDINE-5'-TRIPHOSPHATE	557R 879R

FOCUSED TEMPLATE

MODEL[1] TEMPLATE:5d4c_K_1

5d4c_K_1       1:MEIKRFGRIREVIPLPPLTEIQVESYRRALQADVPPEKRENVGIQAAFRETFPIEEXXXXXXXXXXXXXXXXXXEPPFPQDECREKDLTYQAPLXXXXXX: 100
SecStr          :  EEE  S   SS    TTHHHHHHHHHHH TTS GGG  SSTHHHHHHHH S   ------------------  SS HHHHHHHT   EEE ------:    
ExpBur          :eeeeebeeeeeebebbebbebbeebbeebbbeeeeeeeeeeebbebbeebbeeeee------------------eeeeeeeebeeeeebbebee------:    

5d4c_K_1     101:XXXXXXXXXXXXXXLGHIPLMTEDGSFIINGADRVIVSQIHRSPGVYFTPDPARPGRYIASIIPLPKRGPWIDLEVEPNGVVSMKVNKRKFPLVLLLRVL: 200
SecStr          :--------------  EEE   TTS EEETTEEEEE EEEEE  EEEEEE SSSTT EEEEEE STTSS  EEEEE TTS EEEEESS EEEHHHHHHHT:    
ExpBur          :--------------eeebbbbbebbbbbbeebbbbbbbbbbebbbbbbeebeeeeeeebbbbbbbeebebebebbbbeeeebbbebeeeebebbbbbbbb:    

5d4c_K_1     201:GYDQETLARELGAYGELVQGLMDESVFAMRPEEALIRLFTLLRPGDPPKRDKAVAYVYGLIADPRRYDLGEAGRYKAEEKLGIRLSGRTLARFEDGEFKD: 300
SecStr          :T  HHHHHHHHTTSTTTGGGG  HHHHTS HHHHHHHHHHHH TTS   HHHHHHHHHHHTT TTT    HHHHHHHHHHHT   SSSSSEEEETTEEEE:    
ExpBur          :ebeeeebeeebeebeebbeebbeeebbebeeeebbeebbeebeeebeeeeeebbeebebbbbbeeebbbbebbbebbbebbeeebeeebbbeeeeeebeb:    

5d4c_K_1     301:EVFLPTLRYLFALTAGVPGHEVDDIDHLGNRRIRTVGELMTDQFRVGLARLARGVRERMLMGSEDSLTPAKLVNSRPLEAAIREFFSRSQLSQFKDETNP: 400
SecStr          :SSHHHHHHHHHHHHHT TT     TTSTTSEEEE HHHHHHHHHHHHHHHHHHHHHHHHHSS TTS  HHHH   HHHHHHHHHHHHT SSEEE   SSH:    
ExpBur          :bbbbbbbebbbbbbeeeeebeebeebbbbbbbbbbbbebbbbebbebbeebbebbeeebeeeeeeeeeeeebeeeeebeebbeebbbebebbeebebbbb:    

5d4c_K_1     401:LSSLRHKRRISALGPGGLTRERAGFDVRDVHRTHYGRICPVETPEGANIGLITSLAAYARVDELGFIRTPYRRVVGGVVTDEVVYMTATEEDRYTIAQAN: 500
SecStr          :HHHHHHHTEEES STTS  TTS  HHHHS  TT TTTB SS   SSTTTTTEEEB SS EE TTS EEEEEEEEETTEEEEEEEEE HHHHTTSEEE TT:    
ExpBur          :bbbbbbbbbbbbbbeeeeeeeebeeeebeebebbebbbbebbbeeeeeebbbbbbbbbbeebeebbbebbbbebeebebeeebeebbbeebbebbbbebe:    

5d4c_K_1     501:TPLEGNRIAAERVVARRKGEPVIVSPEEVEFMDVSPKQVFSVNTNLIPFLEHDDANRALMGSNMQTQAVPLIRAQAPVVMTGLEERVVRDSLAALYAEED: 600
SecStr          :  EETTEE  SSEEEEETTEEEEE GGG  EEES GGGGS TTGGG TTGGGB HHHHHHHHHHHTTB   TT B  SEE S HHHHHHHHT SEE SSS:    
ExpBur          :beeeeeebeeeebebbeeeeeeebebeebebbbbbbbbbbbbbbbbbbbbeebeeebbbbbbbbbbebbbbeebbbbbbbbebbeebbebbebbbbbeee:    
Contact         :                                                        b                                           

5d4c_K_1     601:GEVAKVDGNRIVVRYEDGRLVEYPLRRFYRSNQGTALDQRPRVVVGQRVRKGDLLADGPASENGFLALGQNVLVAIMPFDGYNFEDAIVISEELLKRDFY: 700
SecStr          :EEEEEE SSEEEEEETT  EEEEE   SEE SSSBEE  EE   TT EE TT EEEE TTEETTEE  BEEEEEEES  TTTS TT EEEEHHHHHTTTT:    
ExpBur          :bebeeeeeeebbbebeeeeebebebeeeeebbbbbbbbbbeebeeeeebeeeeebbbbbbbeebbbbbbbbbbbbbbebeeebeeebbbbbeebbeeebb:    

5d4c_K_1     701:TSIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEGVVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEKARDVKDTSLRVPPGEGGIV: 800
SecStr          : EEEEEEEEEEEE  TT   B  S  TT  HHHHTTB TTSBB TT EE TT EEE  EEE SS    SHHHHHHHHSS    SEEE  EE  TT  EEE:    
ExpBur          :bbbbbeebebebeeeeeeebebeeebbeeeeeebebbeeebbbeeebebeeeebbbbbbbeeeeeeeeeeeeeeeeeeeeeeeebeeebbebeeeebbeb:    

5d4c_K_1     801:VRTVRLRRGDPGVELKPGVREVVRVYVAQKRKLQVGDKLANRHGNKGVVAKILPVEDMPHLPDGTPVDVILNPLGVPSRMNLGQILETHLGLAGYFLGQR: 900
SecStr          :EEEEEEETTSTT   STTEEEEEEEEEEEEE   TT EEEETTS EEEEEEEE GGGS B TTS B SEEE TTHHHHHTB HHHHHHHHHHHHHHTT E:    
ExpBur          :eeebebeeeeeeeeeeeebebbbbbbbbeebebeeebbbbbbbbbebebeeebeeeebbebeeeeebbbbbbeebbeeeebebbebbbbbbbbbebeebb:    
Contact         :                                                                              b                     

5d4c_K_1     901:YISPIFDGAKEPEIKELLAQAFEVYFGKRKGEGFGVDKREVEVLRRAEKLGLVTPGKTPEEQLKELFLQGKVVLYDGRTGEPIEGPIVVGQMFIMKLYHM:1000
SecStr          :EE  SSS   HHHHHHHHHHHHHHHHHHHHHTT    HHHHHHHHHHHHHTSS TTS HHHHHHHHHHTTEE  B TTT  B SS EEEEEEEEEEBS  :    
ExpBur          :bbbbbebbbeeeebeebbbebbeebbeebeeeeeeeeeebeebbeebeeeeebeeeeeeeebbebbbeebebbbbbeeeeebeeebbbbbbbbbbbbeeb:    

5d4c_K_1    1001:VEDKMHARSTGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEMLTLKSDDIEGRNAAYEAIIKGEDVPEPSVPESFRVLVKELQALALDVQ:1100
SecStr          :HHHH    SS  B TTT  B  STTTT      HHHHHHHHHHT HHHHHHHHTTTTT HHHHHHHHHHHHTT         HHHHHHHHHHHTTT    :    
ExpBur          :eeeeeeeeeeeeeeeeeeeeeeeeeeebeeeebeeebeebeeeeeeeebeeeebbebbbeebbeebeebeeeeeeeeebeeeeeebbebeeeeeeeeeee:    

5d4c_K_1    1101:TLDEKDNPVDIFEGLASK----------------------------------------------------------------------------------:1118
SecStr          : B TTS B  SSTTSS -:    
ExpBur          :eeeeeeeeeebbeeeee-:

Protein Model on 5d4c_K_1_HA_1 (TEMPLATE: 5d4c )

Input Residue Numbers for Focused Sites