[pdbjlvh2]Protein Model on 5d4c_D_1_W

Protein Model on 5d4c_D_1_W_1 (TEMPLATE: 5d4c )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]
MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query F)
1	a	F	D 1 (D)	polymer(polypeptide(L)) [1486 aa]	DNA-directed RNA polymerase subunit beta' :RPOC_THET8
2	b		W 1 (D)	non-polymer(CTP)	CYTIDINE-5'-TRIPHOSPHATE	739D 1029R
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:5d4c_D_1
5d4c_D_1       1:XXKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAA: 100
SecStr          :--     EE     HHHHHHH SSB      B TTT SB TTSSS HHHH  SSTT  SSSS  STTS S B SSS  B S TTHHHH  EEEEEEEEEE:    
ExpBur          :--eeeeeeebebebbeebeeebeeebeebeebbeeeeebeebbbbbbebbbbeeebebeebebeeeeeeeeebeebebebbeeebbeebebbbebebbbb:    

5d4c_D_1     101:HIWFVKDVPSKIGTLLDLSATELEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLD: 200
SecStr          : HHHHHSSS HHHHHTT  HHHHHHHHTTSSEEEEE TT EETTEE  TT EE HHHHHHHHH  EEEEE  TT   SS TT EE TT EEETTEE SS :    
ExpBur          :bbbbbebeebbbbbbbebeeeebeebbbbeebbbbebeebebeeeebeeeeebbbeebeebeebeeeebebeeeeebebebeeebeeeeebbeebebebe:    

5d4c_D_1     201:GVALYRFPRRVRVEYVKKERAGLRLPLAAWVEKEAYKPGEILAELPEPYLFRAEEEGVVELKELEEGAFLVLRREDEPVATYFLPVGMTPLVVHGEIVEK: 300
SecStr          :EEEEEEEEEEEEEEEEEEEEEEEEEETTTB   SSB TT EEEE SS EEEE SS EEEEEEE SSSEEEEEESSSSEEEEEEE EEEEE   TT EE T:    
ExpBur          :bbbbbeebebbebbbeeeeebbbbbeeebbeeeeebeeeeebbebeeebebebeeebebebeebeeebbbbbeeeeeeebebbbbeebeeebeeeeebee:    

5d4c_D_1     301:GQPLAEAKGLLRMPRQVRAAQVEAEEEGETVYLTLFLEWTEPKDYRVQPHMNVVVPEGARVEAGDKIVAAIDPEEEVIAEAEGVVHLHEPASILVVKARV: 400
SecStr          :T EEEEEEEEEE  TTEEEEEEEEEEETTEEEEEEEEEEEEEEEEE  TT EE S TT EE TT EEEE SSGGG EE  SSEEEEEEEEEEEEEE EEE:    
ExpBur          :eeebbebeeebebbeebebeebeeeeeeeebebbbebebeeeeebebeeebebebeeeeebeeeeebbbbeeeeeebebeeebbbebebbbbbbbbebee:    

5d4c_D_1     401:YPFEDDVEVSTGDRVAPGDVLADGGKVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEEMKHPSRARRAKARKRLEVVR: 500
SecStr          :EE SS BS  TT EE TT EEEGGGTEE SS EEEEEETTTTEEEEEE    EEE THHHHHHHHHT  HHHHHHHHHHHTT S HHHHHHHHHHHHHHH:    
ExpBur          :bebeeebebeeeeebeeeeebbbeeebebebebebebbeeeebbbbbebeebebebbbebbbebbeebebeebbeebeeebeeeeeeeebebbebbebbb:    

5d4c_D_1     501:AFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDALLDNGRRGAPVTNPGSDRPL: 600
SecStr          :HHHHHT  GGGGEEEEEEE  GGGS EEE TTS EEE HHHHHHHHHHHHHHHHHHHHHTT  HHHHHHHHHHHHHHHHHHHSTTSSSS  B TT   B :    
ExpBur          :bbeeeebebbebbbebbebebbeebebeeeeeeeeeeebbbbbbeebbebbeebeebeeeeeeeeebbebbebbbebbbbbbbbeeeeeebeeeeeeeeb:    

5d4c_D_1     601:RSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVV: 700
SecStr          :  HHHHHSSTTSHHHHHTSS   SSEEEEEEEE SSS TTEEEEEHHHHHHHSHHHHHHHHHHSTT SSHHHHHHHHHSGGG  HHHHHHHHHHSTT  E:    
ExpBur          :ebebebeeeeebebeeeeeeeeeeeeeebebeebeebebeebbbbbebbbebbeeebbeebeeeebbeeeebbeebbeeeeebeeebbebbeebbeeebb:    

5d4c_D_1     701:LLNRAPTLHRLGIQAFQPVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYITQVRKEKK: 800
SecStr          :EEE SS  SGGGEEEEEEEEESSS EEE HHHHHHHT  TTT EEEEE   SHHHHHHHHHTSBGGG  B TTT SBSS   THHHHHHHHHH     SS:    
ExpBur          :bbbbeeeebebbebbbebebbeeeebebbbbbbebbebeeeebebbbebbeeeeebeebeeeebbbebbbbbbbbebbbbbeeebbbbbbebbbeeeeee:    
Contact         :                                      b                                                             

5d4c_D_1     801:GAGLEFATPEEALAAHERGEVALNAPIKVAGRETSVGRLKYVFANPDEALLAVAHGIVDLQDVVTVRYMGKRLETSPGRILFARIVAEAVEDEKVAWELI: 900
SecStr          :S S EESSHHHHHHHHHHTSS SSSEEEETTEEEEHHHHH EESSHHHHHHHHHTTSS TTS EEEEETTEEEEE HHHHHHHHHHHHHHT HHHHHHHS:    
ExpBur          :beeeebeeeeebeebeeeeebbbbbebebeeeebbbbeeeeebeebeebbebbeeeebebbbbbbbebeeeebebbbbbbbbbebbbebbeeeebbbebb:    

5d4c_D_1     901:QLDVPQEKNSLKDLVYQAFLRLGMEKTARLLDALKYYGFTFSTTSGITIGIDDAVIPEEKKQYLEEADRKLLQIEQAYEMGFLTDRERYDQILQLWTETT:1000
SecStr          : SSS   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT    GGGS   THHHHHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHH:    
ExpBur          :ebeeebbeebbbebbbebbeebebeebbebbbbbbeebeebbeebeeeeeeeebbebeebeeebeebeeebeebeeeeeeeebeeeebbeebbebbeebb:    

5d4c_D_1    1001:EKVTQAVFKNFEENYPFNPLYVMAQSGARGNPQQIRQLCGLRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKLVD:1100
SecStr          :HHHHHHHHHHHHHH TT HHHHHHHHTSS  HHHHHHHHS  B  B TTS B SS B   TTT   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebbebbbebbeeeeeebbbbbbbebebeeeeeebbeebbbbbebeeeeeebeeebbebbeeeeeeeebeebbeeeeeeeeeeeeebeeebeebbebbeb:    
Contact         :                            b                                                                       

5d4c_D_1    1101:VTHEIVVREADCGTTNYISVPLFQPDEVTRSLRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDDVHLLIKAAEAGEIQEVPVRSPLTCQTRYGV:1200
SecStr          :HHTT EEEES       EEEESEEE TT SSEEE  HHHHHHHHTT BBSS EEETTEEE TT B  HHHHHHHHHHHHTTS SEEEE  TTT   TTEE:    
ExpBur          :bbbbbbbeeeebebeeebebebeeeeeeeeeeeebeeebbbbbbbbbbbbeebebeeeebeeeebbebebbeebbebbeeeebeebbbbbbbbbebeebb:    

5d4c_D_1    1201:CQKCYGYDLSMARPVSIGEAVGIVAAQSIGEPGTQLTXXXXXXXXXXXXXXITQGLPRVIELFEARRPKAKAVISEIDGVVRIEETEEKLSVFVESEGFS:1300
SecStr          :EHHHH EETTTTEE  TT  HHHHHHHHHHGGGGG  --------------   HHHHHHHHHTT   SSB  B SS EEEEEEE SS EEEEEE SS E:    
ExpBur          :bbebbbbbbbebeebebbbbbbebbbebbbebbeebe--------------eeebbebbbbbbbbeebeeebebbeeebebeeeeeeeebbbbbeeeeee:    

5d4c_D_1    1301:KEYKLPKEARLLVKDGDYVEAGQPLTRGAIDPHQLLEAKGPEAVERYLVEEIQKVYRAQGVKLHDKHIEIVVRQMMKYVEVTDPGDSRLLEGQVLEKWDV:1400
SecStr          :EEEEE TT  BS  TT EE TT B BSSB  HHHHHHHH HHHHHHHHHHHHHHHHHHTT    HHHHHHHHHHHT EEEEEE TTSS  TT EEEHHHH:    
ExpBur          :eebebeeeeeeebeeeeebebbeebbeebbbbeebbeeeeeebbbebbbebbbebbeeeebebbbbbbbbbbbbbbbbbebeeeeebebbebeebbeeeb:    

5d4c_D_1    1401:EALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASFQNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDQKTLKAIEEARK:1500
SecStr          :HHHHHHHHHTT    EEEEE   HHHHHHTSS HHHHHHHS HHHHHHHHHHHT EE   SHHHHHHHT   SSGGG TTTTT     HHHHHHHHHHHH:    
ExpBur          :eebbeebeeeeeeebeeeebbbbbbebbeebebbbbbbbbeebbebbbebbbebeebebebbbbbebeeeeeebeebbeeeeeeeeeeeeeeeeeeeeee:    

5d4c_D_1    1501:EA--------------------------------------------------------------------------------------------------:1502
SecStr          :H-:    
ExpBur          :e-:
Protein Model on 5d4c_D_1_W_1 (TEMPLATE: 5d4c )

Input Residue Numbers for Focused Sites
