[pdbjlvh2]Protein Model on 1r9s_C_1_N

Protein Model on 1r9s_C_1_N_1 (TEMPLATE: 1r9s )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]
MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query F)
1	a	F	C 1 (A)	polymer(polypeptide(L)) [1381 aa]	DNA-directed RNA polymerase II largest subunit :RPB1_YEAST
2	b		N 1 (R)	non-polymer(UTP)	URIDINE 5'-TRIPHOSPHATE	446R 483D
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:1r9s_C_1
1r9s_C_1       1:XVGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETMDETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHFGHIDLAKPVFHVGFIAKIK: 100
SecStr          :-  S   SS       EE     HHHHHHH          S BTTBSS  SSSS SSS  STT   STT    SSS     EEEEEEEEEE GGGHHHHH:    
ExpBur          :-eeeeeeeeeeeeeeeeeeebebbeebeeebbbebeeeeeeeeeeeeebeebbbeeebbeeeeeeebeeeeebeeebeebebbbebeebbbbbebbebbb:    

1r9s_C_1     101:KVCECVCMHCGKLLLDEHNELMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSXXXXXXLVSRGGCGNTQPTIRKDGLKLVGSWKXXXXXXXXXXXXLR: 200
SecStr          :HHHTTEETTTTEES  TTSHHHHTTTS   HHHHHHHHHHHSSS  B  SEE  ------ EE S    B  EEEEETTEEEEE  ------------ E:    
ExpBur          :ebbebbbbeebebbbbeeeeebeebeeeeeeeeebeebeeebeeeeebeeebee------eeebbebeeebbebeeeebebbbeee------------ee:    

1r9s_C_1     201:VLSTEEILNIFKHISVKDFTSLGFNEVFSRPEWMILTCLPVPPPPVRPSXXXXXXXXXEDDLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHV: 300
SecStr          :EE HHHHHHHHHT  HHHHHHTT  SSS  GGGSEEEEEEE  TTTS  ---------  HHHHHHHHHHHHHHHHHHHHHS   STTSHHHHHHHHHHH:    
ExpBur          :ebebeebbebbeebeeebbebbbbeeeebebbbbbbebbebbbbeebee---------eeebbebbbebbebbeebeeeeeeeeeeeebeebbeebbebb:    

1r9s_C_1     301:ATYMDNDIAGQPQAXXXXXXPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLELDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHP: 400
SecStr          :HHTT SSSSS    ------    SHHHHSSSSSHHHHTTSS   SSEEEEEEEE TTS TTEEEEEHHHHHHSEEEEE  TTTHHHHHHHHHH TTSTT:    
ExpBur          :bbbbbbeeeeeebe------eeebeeebeeeeebebeeeeeeeeeeeebeeebeeeeebebbbbbbbeebbeebbbebebeeebeeebbebbeebbeebe:    

1r9s_C_1     401:GAKYVIRDSGDRIDLRYSKRAGDIQLQYGWKVERHIMDNDPVLFNRQPSLHKMSMMAHRVKVIPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSEETRAE: 500
SecStr          : EEEEE TT  EE TTS GGGS     TT EEEEE  TT EEEEE SS  SSTTEEEEEEEEESSSSEEE GGGHHHHT  TTT EEEEE   SHHHHHH:    
ExpBur          :bbeebbeeeeeebebeeeeeeeebebeeebebbbbbbeebbbbbbbeeebbebbebbbebebbeeebbebbbbbbebbebeeeebebbbebbeeeeebee:    
Contact         :                                             b                                    b                 

1r9s_C_1     501:LSQLCAVPLQIVSPQSNKPCMGIVQDTLCGIRKLTLRDTFIELDQVLNMLYWVPDWDGVIPTPAIIKPKPLWSGKQILSVAIPNGIHLQRFDEGTTLLSP: 600
SecStr          :HHHHSBTGGGSB SSSSSBS    HHHHHHHHHHHSTT EEEHHHHHHHHHHSTT  S     S  SSS EEEHHHHHHHHS TT  EE   TT  SS T:    
ExpBur          :beeeebbbebbbbbbbbebbbbbeeebbbbbbbbbeeebebeeeebeebbeebeeeeeeeeebeeeeeeeebbbbbbbbebbeebbbbeeeeeebeeebe:    

1r9s_C_1     601:KDNGMLIIDGQIIFGVVEKKTVGSSNGGLIHVVTREKGPQVCAKLFGNIQKVVNFWLLHNGFSTGIGDTIADGPTMREITETIAEAKKKVLDVTKEAQAN: 700
SecStr          :TS S EEETTEEEES  SHHHHSS SS HHHHHHHHH HHHHHHHHHHHHHHHHHHHHTT     GGGG   HHHHHHHHHHHHHHHHHHHHHHHHHHTT:    
ExpBur          :ebebbbbeebebebbbbbeebbbeeeebbbbbbbeeeeeeebbebbbbbbbbbbbbbeeeeeeeeeebbebeeebbeebeebbeebeeebeebbeeeeee:    

1r9s_C_1     701:LLTAKHGMTLRESFEDNVVRFLNEARDKAGRLAEVNLKDLNNVKQMVMAGSKGSFINIAQMSACVGQQSVEGKRIAFGFVDRTLPHFSKDDYSPESKGFV: 800
SecStr          :     TTS HHHHHHHHHHHHHHHHHHHHHHHHHHHS TT HHHHHHTTTSS  HHHHHHHHS  EE  BTTBS   SBTTBSSTTS SS  STTTTTEE:    
ExpBur          :ebeeebeeeeeebbeebbeebbeebbeebbeebeeebeeebebbbeeebebeeeeeebbeebbbbbbbeeeeebbeeeeeeebbeebeeeeeebebbbbb:    

1r9s_C_1     801:ENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQSLDTIGGSDAAFEKRYRVD: 900
SecStr          : S TTT   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT EE TTS EE TT  EEESSGGGTTB GGGEEEEE TTSSS HHHHHHHH   :    
ExpBur          :eebeeeeeeeebeebeeebeeeeeeeeeeeeeebeebbebbbbbbbbbbbeeebbbebeeeeebbebbbebbbbbbebbebebbbbeeeeeebeeebbbb:    

1r9s_C_1     901:LLNTDHTLDPSLLESGSEILGDLKLQVLLDEEYKQLVKDRKFLREVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVL:1000
SecStr          :SS TTSS  TTTSSSSTTTTT HHHHHHHHHHHHHHHHHHHHHHHH TT   EEEEES HHHHHHHHHTTTT  TTS     HHHHHHHHHHHTTS  S :    
ExpBur          :beeeeebbeeebbebbeebeeeeebbebbeebbeebeebbeebbeebeebebeeebbbbbebbbbbbeeeeebeeeeebebebeebbebbeebbeebebb:    

1r9s_C_1    1001:RGKNEIIQNAQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIGEPATQMTLXXXXXXXXXXKKVTSGVPR:1100
SecStr          :   SHHHHHHHHHTTHHHHHHHHHHS HHHHHHTS   HHHHHHHHHHHHHHHHHHB  TT  HHHHHHHHHHTTTTT   ----------  S  HHHH:    
ExpBur          :eeeeeeeeebbeebbeebbbbbebbbbbbbbbeebebeeebbeebbebbeebbeebbbeebebbbebbbbbbbbbbeebee----------eeebebbeb:    

1r9s_C_1    1101:LKEILNVAKNMKTPSLTVYLEPGHAADQEQAKLIRSAIEHTTLKSVTIASEIYYDPDPRSTVIPEDEEIIQLHFSLXXXXXXXXXXQQSPWLLRLELDRA:1200
SecStr          :HHHHHHT SS SS  EEEEB SS SS HHHHHHHHHHHS EESGGGEEEEEEEE   TTS SSGGGHHHHHTSS  ----------   SEEEEEEE HH:    
ExpBur          :bebbbebeeebeeebbbbbbeeeebeeeebbeebbbebbebbbeebbeeeeeeebeeeeebebeebeebbeeeeee----------eebeebbbbebeee:    

1r9s_C_1    1201:AMNDKDLTMGQVGERIKQTFKNDLFVIWSEDNDEKLIIRCRVVXXXXXXXXXXAEEDHMLKKIENTMLENITLRGVENIERVVMMKYDRKVPSPTGEYVK:1300
SecStr          :HHHHTT  HHHHHHHHHTTS SSSEEEE  TTSSS EEEEE  ----------   TTHHHHHHHHHHHH EEES TT  EEEEEEE  EEE TTSSEEE:    
ExpBur          :ebeeeebebbebbeebeeebeeebebbbbeeeeeebbbbbbbe----------eeeeeebeebbeebbeebebeebeebeebebeeeeeebeeeebebee:    

1r9s_C_1    1301:EPEWVLETDGVNLSEVMTVPGIDPTRIYTNSFIDIMEVLGIEAGRAALYKEVYNVIASDGSYVNYRHMALLVDVMTTQGGLTSVTRHGFNRSNTGALMRC:1400
SecStr          :  EEEEEEES  HHHHTTSSSB TTT EES HHHHHHHH HHHHHHHHHHHHHHHHHTTS    HHHHHHHHHHHHTTSS   SSHHHHTTSS  HHHHH:    
ExpBur          :eebbbbebebbbbeebeebebbbeeebbbbbbbbbbeeeeeeebbebbbebbeebbeeeeeebbebbbbbbbbbbbeeeebbbbbeebbbebebbbbbbb:    

1r9s_C_1    1401:SFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGAFDVMI-------------------------------------------------------:1445
SecStr          :TTT HHHHHHHHHHTT EE S SHHHHHHTT   SSGGGSS   -:    
ExpBur          :bbeebbebeeebbbbbbebebebbbbbebeeeebeeeebeeeee-:
Protein Model on 1r9s_C_1_N_1 (TEMPLATE: 1r9s )

Input Residue Numbers for Focused Sites
